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PEC Original Annotations
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Essentiality
|
|
Class
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non-essential
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|
References (PMID)
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|
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yibA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yibA
Search strains by all related name:
yibA b3594 ECK3583 JW3568
|
General information (Go to Linear View: )
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Gene Name
|
yibA
|
|
Alternative name
|
b3594,ECK3583,JW3568
|
|
Location, Length
|
3,873,236 - 3,874,078
(
-
)
;
83.36
min
;
843
(bp) ,
280
(aa)
|
|
Product
|
lyase containing HEAT-repeat
|
|
Note
|
ECK3583:JW3568:b3594
|
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Function
|
|
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PID
|
85676449
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIBA_ECOLI
(
P0ADK6
;
P24172; Q2M7Q7
)
|
|
- Protein name
|
RecName: Full=Protein yibA;
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- Synonyms
|
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- Gene name
|
Name=yibA; OrderedLocusNames=b3594, JW3568;
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Homology Analysis
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BLAST
|
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Bacteria
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|
GTOP
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PDB
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PSI-BLAST
|
|
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SWISS-PROT
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BLAST
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RecName: Full=Protein yibA
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PSI-BLAST
|
|
|
nr
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BLAST
|
hypothetical protein Z5015 [Escherichia coli O157:H7 EDL933]
|
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Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MSNTYQKRKA SKEYGLYNQC KKLNDDELFR LLDDHNSLKR ISSARVLQLR GGQDAVRLAI EFCSDKNYIR
0071 RDIGAFILGQ IKICKKCEDN VFNILNNMAL NDKSACVRAT AIESTAQRCK KNPIYSPKIV EQSQITAFDK
0141 STNVRRATAF AISVINDKAT IPLLINLLKD PNGDVRNWAA FAININKYDN SDIRDCFVEM LQDKNEEVRI
0211 EAIIGLSYRK DKRVLSVLCD ELKKNTVYDD IIEAAGELGD KTLLPVLDTM LYKFDDNEII TSAIDKLKRS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttagtgctaa agatgcaaaa agcacacaga
-070 aagcctggaa ttgtcgtcac tccagacagt caaacgataa aaaaagatag cccttgtgga ggttcctgca
0001 atgtcaaata cataccagaa aagaaaggca agtaaagagt atggtttata taatcaatgt aagaaactaa
0071 atgatgatga attatttcgc ttacttgatg atcacaattc cttgaaaagg atttcatctg ccagagtatt
0141 acagttaaga ggtgggcaag acgctgttag attggcaatt gagttctgct ctgataaaaa ttatatccgt
0211 agagatatcg gagcatttat actcgggcaa ataaaaattt gcaaaaaatg cgaagataat gtttttaata
0281 ttttgaacaa tatggcattg aatgataaga gcgcttgcgt tcgagctacg gcaatcgagt caacggctca
0351 gcgatgcaag aaaaacccaa tttattcacc taaaatagta gaacaatctc aaattactgc ttttgataaa
0421 tcgactaatg tcagacgtgc tacagcattt gctatttctg ttatcaatga taaagcaaca attccactat
0491 tgattaatct gttaaaagat ccaaatggag atgtcagaaa ctgggccgca tttgcaataa atatcaataa
0561 atatgataat agtgatatta gggattgttt tgtggagatg cttcaggata aaaatgagga agtccgtatt
0631 gaagcaataa tcggactttc ctacagaaaa gataaaaggg ttttatctgt tttatgcgat gagttaaaaa
0701 aaaatactgt ttatgatgat atcattgaag ctgcgggtga attaggtgat aaaacgctac ttcctgtttt
0771 agatactatg ttgtacaagt ttgatgacaa tgaaattata acttccgcta ttgataagct gaagcgttca
0841 tagcgtgagt tgcctatgca cagtggggga ttcccgccgg cacggtgcag atgctcgacc ggctggaaag
0911 tgaaatcctg gctgaccggg tgagtgagga aag
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