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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yibH
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
yibH
Search strains by all related name:
yibH b3597 ECK3586 JW3571
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General information (Go to Linear View: )
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Gene Name
|
yibH
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Alternative name
|
b3597,ECK3586,JW3571
|
|
Location, Length
|
3,869,036 - 3,870,172
(
+
)
;
83.27
min
;
1137
(bp) ,
378
(aa)
|
|
Product
|
hypothetical protein
|
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Note
|
ECK3586:JW3571:b3597
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Function
|
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PID
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85676446
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIBH_ECOLI
(
P0AFV0
;
P32107; Q2M7R0
)
|
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- Protein name
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RecName: Full=Inner membrane protein yibH;
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- Synonyms
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- Gene name
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Name=yibH; OrderedLocusNames=b3597, JW3571;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
|
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SWISS-PROT
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BLAST
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PSI-BLAST
|
|
|
nr
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BLAST
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hypothetical protein Z5021 [Escherichia coli O157:H7 EDL933]
|
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Pfam 27.0
(database updated :
2013-03
)
|
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Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MDLLIVLTYV ALAWAVFKIF RIPVNQWTLA TAALGGVFLV SGLILLMNYN HPYTFTAQKA VIAIPITPQV
0071 TGIVTEVTDK NNQLIQKGEV LFKLDPVRYQ ARVDRLQADL MTATHNIKTL RAQLTEAQAN TTQVSAERDR
0141 LFKNYQRYLK GSQAAVNPFS ERDIDDARQN FLAQDALVKG SVAEQAQIQS QLDSMVNGEQ SQIVSLRAQL
0211 TEAKYNLEQT VIRAPSNGYV TQVLIRPGTY AAALPLRPVM VFIPEQKRQI VAQFRQNSLL RLKPGDDAEV
0281 VFNALPGQVF HGKLTSILPV VPGGSYQAQG VLQSLTVVPG TDGVLGTIEL DPNDDIDALP DGIYAQVAVY
0351 SDHFSHVSVM RKVLLRMTSW MHYLYLDH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACCCGGAAAT CGCCGCACTT TCTGACCGAA
-070 TTTCCCGGCT GGAGCATCAA CTCGCCGCCG AGAAAAAGAC TGACTATTCC ACGTTCCCGG AGATCTAATT
0001 atggatctat tgattgtttt aacttacgtg gcgctggcgt gggcggtctt taaaatcttc cgcattccgg
0071 taaatcagtg gacgctggcg acggcggcgc tgggaggcgt gtttctggtg agtggtttga ttttgttgat
0141 gaactacaac cacccttaca cttttaccgc gcaaaaggca gtgatagcga tccctatcac gccacaggtg
0211 acgggaattg ttactgaagt cactgacaag aataatcagc ttattcaaaa gggcgaggtg ctttttaagc
0281 tcgacccggt tcgttaccag gcgcgagttg acagacttca ggctgacctg atgacggcga cgcataatat
0351 aaagacgctg cgtgcgcagc tcactgaagc gcaggccaac accacccagg tttcagcgga gcgcgaccgt
0421 ctgtttaaaa attatcaacg ttacttgaaa ggcagccagg cggcggtgaa tccgttctcg gaacgtgaca
0491 tcgacgatgc gcggcaaaat ttcctcgcgc aggatgcgct ggtgaaaggc tcggtggcgg agcaggcgca
0561 gatccagagc cagctcgaca gtatggttaa cggcgagcaa tcgcagattg tgagcttaag agcgcaactt
0631 actgaagcaa aatataacct tgagcagact gtcattcgcg cgccgagcaa tggctacgtt actcaggtac
0701 tgatccgccc aggtacatac gcagctgcct tgccgctgcg tccggtgatg gtcttcatcc ccgagcaaaa
0771 acggcaaatt gtcgcccaat ttcggcaaaa ctcgctgtta cgtctgaaac ctggcgatga tgcggaagtg
0841 gtgtttaacg cgctacctgg gcaggtgttt cacggcaaac tgactagtat tttacctgtc gtgccaggcg
0911 gttcttatca ggcgcagggg gtattgcaat cattaacggt cgtgcccggc acggacggtg tgctgggaac
0981 cattgaactg gaccctaacg atgatatcga tgccttaccc gacggcatct acgcccaggt ggcggtttac
1051 tccgaccatt tcagccatgt ttcggtgatg cggaaagtgc tgctaagaat gaccagctgg atgcattatc
1121 tttatttgga tcattgaGGG GGAGGGGGGA GATTATGGAA CTTTGCTCCT TGTAAGGACT AATTATTTTT
1191 GCATATTACT TCATTAGCTT CGATGATTTT TCTTTAATAT TCATTAT
|
