MG1655
W3110
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Gene Report : dapB
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  dapB
Related strains
     Strains Search Search strains by gene name:  dapB   Search strains by all related name:  dapB b0031 ECK0032 JW0029

General information  (Go to Linear View:)
 Gene Name dapB  
 Alternative name b0031,ECK0032,JW0029  
 Location, Length 28,374 - 29,195 (  +  ) ;   0.61 min ; 822 (bp) ,   273 (aa) Go to Linear View
 Product dihydrodipicolinate reductase  
 Note ECK0032:JW0029:b0031  
 Function  
 PID 21321913  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) DAPB_ECOLI ( P04036 )
    -  Protein name RecName: Full=Dihydrodipicolinate reductase; Short=DHPR; EC=1.3.1.26;  
    -  Synonyms  
    -  Gene name Name=dapB; OrderedLocusNames=b0031, JW0029;  

 Linear View
View Location
   20.0  –  45.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Dihydrodipicolinate reductase; Short=DHPR  
         PSI-BLAST RecName: Full=Dihydrodipicolinate reductase; Short=DHPR
    nr
         BLAST dihydrodipicolinate reductase [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc dapB 

Sequences
Amino acid
FASTA format
0001 MHDANIRVAI AGAGGRMGRQ LIQAALALEG VQLGAALERE GSSLLGSDAG ELAGAGKTGV TVQSSLDAVK 
0071 DDFDVFIDFT RPEGTLNHLA FCRQHGKGMV IGTTGFDEAG KQAIRDAAAD IAIVFAANFS VGVNVMLKLL 
0141 EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAH ALDKDLKDCA VYSREGHTGE RVPGTIGFAT 
0211 VRAGDIVGEH TAMFADIGER LEITHKASSR MTFANGAVRS ALWLSGKESG LFDMRDVLDL NNL

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             TTATCATTAA TTTCTAATTA TCAGCGTTTT 
-070 TGGCTGGCGG CGTAGCGATG CGCTGGTTAC TCTGAAAACG GTCTATGCAA ATTAACAAAA GAGAATAGCT 
0001 atgcatgatg caaacatccg cgttgccatc gcgggagccg gggggcgtat gggccgccag ttgattcagg 
0071 cggcgctggc attagagggc gtgcagttgg gcgctgcgct ggagcgtgaa ggatcttctt tactgggcag 
0141 cgacgccggt gagctggccg gagccgggaa aacaggcgtt accgtgcaaa gcagcctcga tgcggtaaaa 
0211 gatgattttg atgtgtttat cgattttacc cgtccggaag gtacgctgaa ccatctcgct ttttgtcgcc 
0281 agcatggcaa agggatggtg atcggcacta cggggtttga cgaagccggt aaacaagcaa ttcgtgacgc 
0351 cgctgccgat attgcgattg tctttgctgc caattttagc gttggcgtta acgtcatgct taagctgctg 
0421 gagaaagcag ccaaagtgat gggtgactac accgatatcg aaattattga agcacatcat agacataaag 
0491 ttgatgcgcc gtcaggcacc gcactggcaa tgggagaggc gatcgcccac gcccttgata aagatctgaa 
0561 agattgcgcg gtctacagtc gtgaaggcca caccggtgaa cgtgtgcctg gcaccattgg ttttgccacc 
0631 gtgcgtgcag gtgacatcgt tggtgaacat accgcgatgt ttgccgatat tggcgagcgt ctggagatca 
0701 cccataaggc gtccagccgt atgacatttg ctaacggcgc ggtaagatcg gctttgtggt tgagtggtaa 
0771 ggaaagcggt ctttttgata tgcgagatgt acttgatctc aataatttgt aaCCACAAAA TATTTGTTAT 
0841 GGTGCAAAAA TAACACATTT AATTTATTGA TTATAAAGGG CTTTAATTTT TGGCCCTTTT ATTTTTGGTG 
0911 TTATGTTTTT AA