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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
agaA
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
agaA
Search strains by all related name:
agaA b3135 ECK3123 JW5527 yraA
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General information (Go to Linear View: )
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Gene Name
|
agaA
|
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Alternative name
|
b3135,ECK3123,JW5527,yraA
|
|
Location, Length
|
3,280,977 - 3,281,480
(
+
)
;
70.61
min
;
504
(bp) ,
167
(aa)
|
|
Product
|
predicted truncated N-acetylgalactosamine-6-phosphate deacetylase
|
|
Note
|
ECK3123:JW5527:b3135
|
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Function
|
|
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PID
|
85675931
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
AGAA_ECOLI
(
P42906
;
P76670; Q2M975; Q6BF43
)
|
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- Protein name
|
RecName: Full=Putative N-acetylgalactosamine-6-phosphate deacetylase; EC=3.5.1.-;
|
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- Synonyms
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- Gene name
|
Name=agaA; OrderedLocusNames=b3135, JW5527;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
|
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PDB
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PSI-BLAST
|
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SWISS-PROT
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BLAST
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PSI-BLAST
|
|
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nr
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BLAST
|
N-acetylglucosamine-6-phosphate deacetylase
|
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Pfam 27.0
(database updated :
2013-03
)
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|
Pfam
|
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| Sequences |
Amino acid
FASTA format
|
0001 MHCYNGMTGL HHREPGMVGA GLTDKRAWLE LIADGHHVHP AAMSLCCCCA KERIVLITDA MQAAGMPDGR
0071 YTLCGEEVQM HGGVVRTASG GLAGSTLSVD AAVRNMVELT GVTPAEAIHM ASLHPARMLG VDGVLGSLKP
0141 GKRASVVALD SGLHVQQIWI QGQLASF
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATGGGGATTA CCTTCCTGTT CTCGGTGATG
-070 TCCGGCGTGA TGTCTCGCTG CGACCTGGCA ACAAACCCGC GCCGCATTTG ATGCTGGTGC CGACGGCCTG
0001 gtgcattgct ataacgggat gacaggttta catcaccgcg aaccgggaat ggttggcgcg ggattaacgg
0071 acaagcgcgc ctggctggaa ctgatagccg atggtcatca tgtgcatccg gcggcaatgt cgctgtgttg
0141 ttgctgtgcg aaagagagaa tcgtactgat caccgacgcg atgcaggcag ctgggatgcc ggatggtcgc
0211 tatacgttat gtggtgaaga agtgcagatg cacggtggcg ttgtccgtac cgcgtctggt gggctggcgg
0281 gcagtacgct gtctgttgat gcggcagtgc gcaatatggt cgagttgacg ggcgtaacgc ctgcggaagc
0351 catccatatg gcgtcgctgc atccggcgcg aatgctgggt gttgatggtg ttctgggatc gcttaaaccg
0421 ggcaaacgcg ccagcgtcgt tgcgctggat agcgggctac atgtgcaaca aatctggatt cagggtcaat
0491 tagcttcgtt ttgaTAGTTT GCTCCTTTAT TGGGCCTTCA CTTCCCCCGT AAGGCCTTTC TTTTTCTTTC
0561 GTTTTGATCT GTGCAGCGGT GTCGGATGCG ACGCTAACGC GTCT
|
