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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
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|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
ykgH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ykgH
Search strains by all related name:
ykgH b0310 ECK0308 JW0302
|
General information (Go to Linear View: )
|
|
Gene Name
|
ykgH
|
|
Alternative name
|
b0310,ECK0308,JW0302
|
|
Location, Length
|
323,920 - 324,588
(
-
)
;
6.97
min
;
669
(bp) ,
222
(aa)
|
|
Product
|
predicted inner membrane protein
|
|
Note
|
ECK0308:JW0302:b0310
|
|
Function
|
|
|
PID
|
85674453
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YKGH_ECOLI
(
P77180
;
Q2MCB3
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein ykgH;
|
|
- Synonyms
|
|
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- Gene name
|
Name=ykgH; OrderedLocusNames=b0310, JW0302;
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Homology Analysis
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|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=Uncharacterized protein ykgH
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MREQIKQDID LIEILFYLKK KIRVILFIMA ICMAMVLLFL YINKDNIKVI YSLKINQTTP GILVSCDSNN
0071 NFACQTTMTE DVIQRITTFF HTSPDVKNRE IRLEWSGDKR ALPTAEEEIS RVQASIIKWY ASEYHNGRQV
0141 LDEIQTPSAI NSELYTKMIY LTRNWSLYPN GDGCVTISSP EIKNKYPAAI CLALGFFLSI VISVMFCLVK
0211 KMVDEYQQNS GQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttcatgatgc gggctttttg ctgatattta
-070 acccgaacat tcctgataca gactattaat acaaccttat ctgcgacaga ttttattctc tggatatatt
0001 atgcgtgaac aaatcaaaca ggatatcgat ctgattgaga ttttatttta tctgaagaaa aagattcgtg
0071 ttatcctttt tattatggct atatgtatgg ctatggtgct gttgtttctg tatatcaata aagacaatat
0141 aaaagtgatt tacagcctaa aaataaacca gacaacgcca ggtatacttg ttagctgtga tagcaataat
0211 aattttgcct gtcagactac aatgactgaa gatgttattc agcgaattac tacatttttt cacaccagcc
0281 cagatgtcaa gaacagagaa ataaggctgg aatggtcagg agataagaga gctttaccaa ctgctgaaga
0351 ggaaatatct cgcgtgcagg cctctattat caaatggtat gcgtcagaat atcataatgg caggcaagtt
0421 ctcgatgaga tacaaacgcc ttcagcaatt aacagtgagc tttatacaaa aatgatatac ctgaccagga
0491 actggtcatt gtatccgaac ggtgatggct gtgtaactat aagctcacca gaaataaaaa ataaataccc
0561 tgctgccatt tgcctggctc tgggattttt tctaagcatt gtaatttctg taatgttttg ccttgtcaaa
0631 aaaatggtag atgaatacca acaaaactct gggcagtaat aaacaacatt ctgatagaga gtgcctgtat
0701 aaagctgaag tgacaatgac cgggaaggga acccgttttc aggaatggat gcctgtcttt ttcactgta
|
