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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
ykgE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ykgE
Search strains by all related name:
ykgE b0306 ECK0305 JW5041
|
General information (Go to Linear View: )
|
|
Gene Name
|
ykgE
|
|
Alternative name
|
b0306,ECK0305,JW5041
|
|
Location, Length
|
320,832 - 321,551
(
+
)
;
6.91
min
;
720
(bp) ,
239
(aa)
|
|
Product
|
predicted oxidoreductase
|
|
Note
|
ECK0305:JW5041:b0306
|
|
Function
|
|
|
PID
|
85674450
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YKGE_ECOLI
(
P77252
;
Q2MCB6
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein ykgE;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ykgE; OrderedLocusNames=b0306, JW5041;
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Homology Analysis
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|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted oxidoreductase [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNVNFFVTCI GDALKSRMAR DSVLLLEKLG CRVNFPEKQG CCGQPAINSG YIKEAIPGMK NLIAALEDND
0071 DPIISPAGSC TYAVKSYPTY LADEPEWASR AAKVAARMQD LTSFIVNKLG VVDVGASLQG RAVYHPSCSL
0141 ARKLGVKDEP LTLLKNVRGL ELLTFAEQDT CCGFGGTFSV KMAEISGEMV KEKVAHLMEV RPEYLIGADV
0211 SCLLNISGRL QREGQKVKVM HIAEVLMSR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTAGCCAATT AAAAAAGAAC GCCATATTTA
-070 TTGATGATTG ATCCCCCGGT GGGGGGGAAA CATCGGGCAT AAATGGGCAT GAAGTAATGG AGTATTAGTT
0001 gtgaatgtca atttctttgt cacctgtatt ggtgacgccc tgaaatcaag aatggcacga gactccgtgc
0071 tgctactgga aaaactcggc tgtcgcgtaa atttcccgga gaaacaggga tgctgcggtc agcctgcgat
0141 caatagcggt tatatcaaag aagcgattcc agggatgaaa aatctgatcg ccgcactgga ggataacgac
0211 gatcccatta tttcaccggc tggctcttgc acctatgccg taaaaagtta cccgacgtat ctggcggatg
0281 aacctgaatg ggcatcacgt gccgcaaagg ttgccgcgcg tatgcaggat ctcacctctt ttattgttaa
0351 taaattaggg gtagtcgatg taggtgccag tttgcaaggg agagcggtgt atcacccatc ttgtagcctg
0421 gcccgtaagc tgggagtgaa ggacgagcca cttacgctgc tgaaaaatgt gcgtggactg gagctgttga
0491 cctttgctga acaggatacc tgctgcggat ttggcggcac gttctcggtc aaaatggccg aaatatccgg
0561 cgagatggtg aaagaaaagg ttgcgcacct gatggaagtc cgccctgagt atttaattgg tgctgacgtg
0631 agttgcctgc taaacatcag tgggcgatta caacgggaag ggcagaaagt caaagtgatg catattgctg
0701 aagtgttgat gagccgctga GGATATAAAG ATGTCGATCA AAACCAGTAA TACAGATTTT AAGACACGCA
0771 TCCGTCAGCA AATTGAAGAT CCGATCATGC GCAAAGCGGT GGCAAACGCG
|
