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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
insF
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Related strains
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Strains Search
|
Search strains by gene name:
insF
Search strains by all related name:
insF b0299 ECK0299 JW0293
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General information (Go to Linear View: )
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Gene Name
|
insF
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Alternative name
|
b0299,ECK0299,JW0293
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Location, Length
|
314,811 - 315,677
(
+
)
;
6.78
min
;
867
(bp) ,
288
(aa)
|
|
Product
|
IS3 element protein InsF
|
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Note
|
ECK0299:JW0293:b0299
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Function
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PID
|
85674444
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
INSF_ECOLI
(
P05822
;
O08009; O08012; O08304; P77673; Q2MBI8
)
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- Protein name
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RecName: Full=Transposase insF for insertion sequence IS3A/B/C/D/E/fA;
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- Synonyms
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- Gene name
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Name=insF6; Synonyms=yaaB; OrderedLocusNames=ECOK12F002;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
|
transposase [Plasmid F]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
|
0001 MKYVFIEKHQ AEFSIKAMCR VLRVARSGWY TWCQRRTRIS TRQQFRQHCD SVVLAAFTRS KQRYGAPRLT
0071 DELRAQGYPF NVKTVAASLR RQGLRAKASR KFSPVSYRAH GLPVSENLLE QDFYASGPNQ KWAGDITYLR
0141 TDEGWLYLAV VIDLWSRAVI GWSMSPRMTA QLACDALQMA LWRRKRPRNV IVHTDRGGQY CSADYQAQLK
0211 RHNLRGSMSA KGCCYDNACV ESFFHSLKVE CIHGEHFISR EIMRATVFNY IECDYNRWRR HSWCGGLSPE
0281 QFENKNLA
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGTCTACCGA GATTGCACGT CTCAAACGCC
-070 AGCTGGCAGA ACGGGATGAA GAGCTGGCTA TCCTCCAAAA GGCCGCGACA TACTTCGCGA AGCGCCTGAA
0001 atgaagtatg tctttattga aaaacatcag gctgagttca gcatcaaagc aatgtgccgc gtgctccggg
0071 tggcccgcag cggctggtat acgtggtgtc agcggcggac aaggataagc acgcgtcagc agttccgcca
0141 acactgcgac agcgttgtcc tcgcggcttt tacccggtca aaacagcgtt acggtgcccc acgcctgacg
0211 gatgaactgc gtgctcaggg ttaccccttt aacgtaaaaa ccgtggcggc aagcctgcgc cgtcagggac
0281 tgagggcaaa ggcctcccgg aagttcagcc cggtcagcta ccgcgcacac ggcctgcctg tgtcagaaaa
0351 tctgttggag caggattttt acgccagtgg cccgaaccag aagtgggcag gagacatcac gtacttacgt
0421 acagatgaag gctggctgta tctggcagtg gtcattgacc tgtggtcacg tgccgttatt ggctggtcaa
0491 tgtcgccacg catgacggcg caactggcct gcgatgccct gcagatggcg ctgtggcggc gtaagaggcc
0561 ccggaacgtt atcgttcaca cggaccgtgg aggccagtac tgttcagcag attatcaggc gcaactgaag
0631 cggcataatc tgcgtggaag tatgagcgca aaaggttgct gctacgataa tgcctgcgtg gaaagcttct
0701 ttcattcgct gaaagtggaa tgtatccatg gagaacactt tatcagccgg gaaataatgc gggcaacggt
0771 gtttaattat atcgaatgtg attacaatcg gtggcggcgg cacagttggt gtggcggcct cagtccggaa
0841 caatttgaaa acaagaacct cgcttagGCC TGTGTCCATA TTACGTGGGT AGGATCATAA AGTCCTCGGG
0911 TCGTTGTCCA CTCTTTTGGC ATGTCAGCAT ATTCACATAC CGTACCAGCA AAAGTTT
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