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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yagU
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
yagU
Search strains by all related name:
yagU b0287 ECK0286 JW0281
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General information (Go to Linear View: )
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Gene Name
|
yagU
|
|
Alternative name
|
b0287,ECK0286,JW0281
|
|
Location, Length
|
302,215 - 302,829
(
+
)
;
6.50
min
;
615
(bp) ,
204
(aa)
|
|
Product
|
conserved inner membrane protein
|
|
Note
|
ECK0286:JW0281:b0287
|
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Function
|
|
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PID
|
85674431
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAGU_ECOLI
(
P0AAA1
;
P77262; Q2MCD5
)
|
|
- Protein name
|
RecName: Full=Inner membrane protein yagU;
|
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- Synonyms
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- Gene name
|
Name=yagU; OrderedLocusNames=b0287, JW0281;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
|
|
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
|
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
hypothetical protein Z0353 [Escherichia coli O157:H7 EDL933]
|
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Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNIFEQTPPN RRRYGLAAFI GLIAGVVSAF VKWGAEVPLP PRSPVDMFNA ACGPESLIRA AGQIDCSRNF
0071 LNPPYIFLRD WLGLTDPNAA VYTFAGHVFN WVGVTHIIFS IVFAVGYCVV AEVFPKIKLW QGLLAGALAQ
0141 LFVHMISFPL MGLTPPLFDL PWYENVSEIF GHLVWFWSIE IIRRDLRNRI THEPDPEIPL GSNR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AACTATCTTG TTATACAAAA CAATACAGTT
-070 CTTTACATTT GCCTTGTTTT ATGAATACTC CTGAAGAGGT GTATAACATA ATGGTACAAG CAGGGTAGAT
0001 atgaatatat ttgaacaaac tccaccgaac cgcagacgtt atggtcttgc tgcattcatt gggctgattg
0071 ctggcgttgt ttccgcattc gtgaagtggg gggctgaagt tccattgccg ccacgtagcc cggtggatat
0141 gtttaatgca gcgtgtggcc cggaatcatt aatcagggct gcaggccaaa ttgattgctc gcgtaatttt
0211 ctcaatccac cgtatatttt tcttcgagac tggttggggc tgacagatcc caatgcggct gtttatacct
0281 ttgccgggca tgtctttaac tgggttggtg ttacgcacat tatcttttcg atagtgtttg ctgtcggtta
0351 ttgtgtggtc gctgaagtat ttccaaaaat taaactctgg cagggcttac tggcaggtgc tttagcccaa
0421 ctttttgttc atatgatttc attccctctc atgggactga cgccacctct gtttgatctc ccgtggtatg
0491 agaatgtttc tgaaattttt ggacatttag tctggttctg gtctattgaa attattcgca gagatttacg
0561 aaacagaatt actcatgagc cagaccctga gatcccttta ggctcaaaca gataaTGCAT TGAATGATAA
0631 AAATGGCGCA AATACAGCGC CATTTTTATA GGTTAAAAAC ATTGCTTTTT ATATTCTGAT GCAGATAGTC
0701 AGTGAGTATA TCGCG
|
