|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yagR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yagR
Search strains by all related name:
yagR b0284 ECK0283 f732 JW0278 paoC
|
General information (Go to Linear View: )
|
|
Gene Name
|
yagR
|
|
Alternative name
|
b0284,ECK0283,f732,JW0278,paoC
|
|
Location, Length
|
297,960 - 300,158
(
-
)
;
6.41
min
;
2199
(bp) ,
732
(aa)
|
|
Product
|
predicted oxidoreductase with molybdenum-binding domain
|
|
Note
|
ECK0283:JW0278:b0284
|
|
Function
|
|
|
PID
|
85674428
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAGR_ECOLI
(
P77489
;
Q2MCD8
)
|
|
- Protein name
|
RecName: Full=Putative xanthine dehydrogenase yagR molybdenum-binding subunit; EC=1.17.1.4;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yagR; OrderedLocusNames=b0284, JW0278;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted oxidoreductase with molybdenum-binding domain [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKFDKPAGEN PIDQLKVVGR PHDRIDGPLK TTGTARYAYE WHEEAPNAAY GYIVGSAIAK GRLTALDTDA
0071 AQKAPGVLAV ITASNAGALG KGDKNTARLL GGPTIEHYHQ AIALVVAETF EQARAAASLV QAHYRRNKGA
0141 YSLADEKQAV NQPPEDTPDK NVGDFDGAFT SAAVKIDATY TTPDQSHMAM EPHASMAVWD GNKLTLWTSN
0211 QMIDWCRTDL AKTLKVPVEN VRIISPYIGG GFGGKLFLRS DALLAALAAR AVKRPVKVML PRPSIPNNTT
0281 HRPATLQHLR IGADQSGKIT AISHESWSGN LPGGTPETAV QQSELLYAGA NRHTGLRLAT LDLPEGNAMR
0351 APGEAPGLMA LEIAIDELAE KAGIDPVEFR ILNDTQVDPA DPTRCFSRRQ LIECLRTGAD KFGWKQRNAT
0421 PGQVRDGEWL VGHGVAAGFR NNLLEKSGAR VHLEQNGTVT VETDMTDIGT GSYTILAQTA AEMLGVPLEQ
0491 VAVHLGDSSF PVSAGSGGQW GANTSTSGVY AACMKLREMI ASAVGFDPEQ SQFADGKITN GTRSATLHEA
0561 TAGGRLTAEE SIEFGTLSKE YQQSTFAGHF VEVGVHSATG EVRVRRMLAV CAAGRILNPK TARSQVIGAM
0631 TMGMGAALME ELAVDDRLGY FVNHDMAGYE VPVHADIPKQ EVIFLDDTDP ISSPMKAKGV GELGLCGVSA
0701 AIANAVYNAT GIRVRDYPIT LDKLLDKLPD VV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cgctgttcgc cagcgcccat cccaccgctg
-070 aaaacacctt taaactcctg ttggcgaagc gaacgcttgc ctccgtactg gctgaagcga gggcacaggc
0001 atgaaatttg ataaacccgc aggggaaaac ccgatcgatc agctgaaggt tgtcggtcgt ccccatgacc
0071 gcatcgacgg accgctgaaa actaccggca cggcacgcta cgcctacgaa tggcatgaag aagcccccaa
0141 cgccgcctat ggctatatcg tcggttccgc cattgccaaa ggacgcctca ccgcccttga tacggacgcc
0211 gcgcaaaaag cgccgggcgt actggctgtc attaccgcca gtaacgccgg ggcactcggc aaaggcgaca
0281 aaaacaccgc caggctgtta ggcggcccca ctattgagca ctatcatcag gccattgcgc tggtagtggc
0351 cgagaccttc gaacaggcgc gagcggcggc ctcgctggtg caggcacact atcgccgtaa taaaggagct
0421 tactccctgg cggacgaaaa acaggccgtc aatcagccgc cggaagacac gcccgacaaa aacgtcggtg
0491 actttgacgg ggctttcacc tccgctgcgg tgaagattga tgctacctac acgaccccgg accagagcca
0561 tatggcgatg gagccgcatg cctcgatggc cgtctgggat ggaaataagc ttaccctctg gacctcaaat
0631 cagatgattg actggtgccg caccgatctg gcaaaaacgc tgaaagttcc cgtggagaat gtgcgtatta
0701 tctccccgta tatcggcgga gggtttggcg gcaagctgtt cctgagaagc gatgcgctgc tggcggccct
0771 cgccgcccga gcggtgaaac gtccggttaa agtgatgctc ccccgcccct ctattcccaa taacaccacg
0841 caccgccccg ccacccttca gcacttgcgt atcggtgccg accagagcgg gaaaatcacc gctatctcac
0911 atgaaagctg gtctggaaac ctgcccggcg gcacgccgga aacggcggta cagcaaagcg aattactcta
0981 cgccggggcg aatcgtcata ccggcctgcg gctcgccacg cttgatttgc cggaagggaa cgccatgcgt
1051 gcgcccggcg aagcccccgg tctgatggcg ctcgaaatcg cgatcgacga actggcggaa aaagcgggca
1121 tcgatcccgt cgagtttcgc atcctgaatg acactcaggt tgaccccgcc gacccgacgc gctgcttctc
1191 tcgccgtcag cttatcgagt gcttgcgcac cggagcggat aaatttggct ggaagcagcg caacgccaca
1261 cccggacagg tgcgcgacgg ggagtggcta gtcggccacg gtgttgcggc gggctttcgc aataatctgc
1331 tggaaaaatc gggtgctcgg gttcacctcg aacaaaacgg caccgttacc gtagaaacgg acatgaccga
1401 cattggcacc ggcagctaca ccattctggc ccagacggca gcggaaatgc ttggcgtacc gctggagcag
1471 gttgcggttc acctcggcga ttccagtttc ccggtttctg cgggttctgg tggacaatgg ggcgcgaata
1541 cctccacctc cggcgtttac gccgcctgta tgaagcttcg cgaaatgatt gcctcggcag tcgggtttga
1611 tcctgagcag tcgcagtttg ccgacggcaa gattaccaac ggtacccgaa gcgccacgct acatgaagcc
1681 accgcaggcg gcagactgac agcggaagag agcattgaat tcggaacact gagcaaagag taccagcagt
1751 cgacctttgc cgggcatttt gtggaggtcg gcgtgcatag cgcgacggga gaagttcggg tccggcgtat
1821 gctcgctgtg tgtgctgcag gacgcatcct gaatccgaaa actgcgcgca gccaggtcat tggcgcaatg
1891 actatgggca tgggcgcggc actgatggag gagctggcgg tggatgaccg tttgggctac ttcgttaatc
1961 acgatatggc ggggtatgag gtgccggttc atgcggatat cccaaaacag gaggtgattt tcctggatga
2031 taccgacccc atatcctccc cgatgaaggc caaaggtgtc ggtgagctgg gcctgtgcgg cgtgagcgcg
2101 gctatcgcca acgcggtgta taacgccacc ggtattcggg tacgggatta tcccatcact ctggataagc
2171 tgctcgataa gctgccggat gtggtttaag gaggaacaat gtcatacccg ctttttgaca aagacgaaca
2241 ctggcataag ccagagcagg cgtttctcac cgatgaccac cggaccattc tgcgcttcg
|
