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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
intF
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Related strains
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Strains Search
|
Search strains by gene name:
intF
Search strains by all related name:
intF b0281 ECK0280 JW0275 yagO
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General information (Go to Linear View: )
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Gene Name
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intF
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Alternative name
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b0281,ECK0280,JW0275,yagO
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Location, Length
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294,920 - 296,320
(
-
)
;
6.35
min
;
1401
(bp) ,
466
(aa)
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Product
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predicted phage integrase
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Note
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CP4-6 prophage region; ECK0280:JW0275:b0281
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Function
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PID
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85674425
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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INTF_ECOLI
(
P71298
;
Q2MCE1
)
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- Protein name
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RecName: Full=Putative prophage CP4-6 integrase;
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- Synonyms
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- Gene name
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Name=intF; Synonyms=yagO; OrderedLocusNames=b0281, JW0275;
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| Sequences |
Amino acid
FASTA format
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0001 MFIPSIYLHQ QLHYCKTAIL NWSRKMALSR QKFTFERLRR FTLPEGKKQT FLWDADVTTL ACRATSGAKA
0071 FVFQSVYAGK TLRMTIGNIN DWKIDDARAE ARRLQTLIDT GIDPRIAKAV KIAEAESLQA ESRKTKVTFS
0141 VAWEDYLQEL RTGISAKTKR PYSTRYIADH INLSSRGGES KKRGQGPTSA GPLASLLNLP LSELTPDYIA
0211 AWLSTERQNR PTVTAHAYRL LRAFIKWSNY QKKYQGIIPG DLAQDYNVRK MVPVSASKAD DCLQKEQLKS
0281 WFSAVRSLNN PIASAYLQVL LLTGARREEI ASLRWSDVDF KWSSMRIKDK IEGERIIPLT PYVSELLNVL
0351 AQSPNSDVNK EGWVFRSNSK SGKIIEPRSA HNRALVLAEL PHISLHGLRR SFGTLAEWVE VPTGIVAQIM
0421 GHKPSALAEK HYRRRPLDLL RKWHEKIETW ILNEAGITIK NNVDMR
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 catttttaac tacttgagca atcaatcaaa
-070 acaacatact ttatattata aaacaccaag ttatagcaat aaacccgttg attgaaatta acaaaagttg
0001 atgtttattc cctccattta cttacaccag cagttacatt attgtaagac agcaattctc aactggagcc
0071 gaaaaatggc gctttcaaga caaaaattta ccttcgaaag acttcgcaga ttcaccttac cggaagggaa
0141 aaaacaaact tttctttggg atgcagatgt aacaaccctg gcatgccgag caactagcgg agcaaaagcc
0211 tttgtattcc aaagcgtata tgcggggaaa acccttcgca tgactattgg caacattaac gactggaaga
0281 ttgatgatgc gagagccgag gcaagacggt tacaaacatt gatcgataca gggatagatc cacgaattgc
0351 taaggctgta aaaatcgcag aagcagaatc cctgcaggca gaatcacgta aaacaaaagt gactttctcc
0421 gtcgcctggg aagactatct tcaagaattg agaaccggta tcagtgcaaa aactaaacgc ccatattcta
0491 ctcgatacat tgccgatcac attaacttgt ccagtcgtgg aggcgaaagt aaaaaaagag gccaaggccc
0561 gacttcggct ggaccattgg ctagtttgct caacctgccg ttatcggagc taaccccaga ttacatagca
0631 gcgtggctga gtacagaaag gcaaaataga cctaccgtca ctgctcacgc ttatcgccta ctacgtgctt
0701 tcatcaaatg gagtaattat cagaaaaaat atcaagggat cattcctggc gatctggcac aagattacaa
0771 cgtaagaaaa atggttcccg tgtcagcgag taaagctgat gattgcctgc aaaaggaaca actaaaaagc
0841 tggtttagtg ccgtgcgtag cctcaataat cctattgcat cggcctatct ccaagtactt ttgctcactg
0911 gtgctcggcg tgaagaaatt gcgtcgcttc gctggtcaga cgtagatttc aaatggtcaa gcatgcgaat
0981 taaagacaag atcgaaggtg aacgtatcat ccctctcact ccttatgttt ctgaattgtt aaatgtacta
1051 gcgcaatccc caaattctga cgtaaataag gagggttggg ttttcagaag taacagtaaa agtggcaaaa
1121 ttattgagcc gcgttcagcg cacaacagag cattagtgct ggctgagtta ccacatatca gccttcacgg
1191 tttacgtcgt agttttggta ctttggccga gtgggttgaa gttcccactg gtattgttgc tcaaattatg
1261 ggacacaaac ccagcgctct tgccgaaaaa cactatcgcc gtcgtccgtt agatctgtta cgaaaatggc
1331 acgagaaaat tgagacatgg atcttaaatg aagcaggtat taccataaaa aacaacgttg atatgcgttg
1401 attccattaa aaatcaacat attacaaaat atcatcaact attgatcaag atagattttc atgtatcgta
1471 atacacagtt tagtcaatga tacagcaact a
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