|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yagN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yagN
Search strains by all related name:
yagN b0280 ECK0279 JW0274
|
General information (Go to Linear View: )
|
|
Gene Name
|
yagN
|
|
Alternative name
|
b0280,ECK0279,JW0274
|
|
Location, Length
|
294,363 - 294,803
(
-
)
;
6.34
min
;
441
(bp) ,
146
(aa)
|
|
Product
|
hypothetical protein
|
|
Note
|
CP4-6 prophage region; ECK0279:JW0274:b0280
|
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Function
|
|
|
PID
|
85674424
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAGN_ECOLI
(
P71297
;
Q2MCE2
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein yagN;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yagN; OrderedLocusNames=b0280, JW0274;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
CP4-6 prophage; predicted protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MATPATVSIE PTLAAIRARW CINSSKTTQS FNDPASMEEV VEYLKGTYSA LRKSVACAKL KILHLKQRMQ
0071 NATNFLARLM SCKNQASRSH HSTAKSAKSA LSSDSGDGSD PDPEPETFPS AFITTPTNSI MLKAFFANIS
0141 ITEVAK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 catattacaa aatatcatca actattgatc
-070 aagatagatt ttcatgtatc gtaatacaca gtttagtcaa tgatacagca actacacagg agataagcca
0001 atggcaaccc cagcaactgt atccatagaa cccactctgg cagctatcag agctcgctgg tgtattaatt
0071 caagtaaaac aactcaatcc tttaacgatc ctgcgtccat ggaagaggtt gtcgagtatc tcaaaggaac
0141 atactcagct cttcgcaagt ctgtcgcatg cgccaaactg aaaattttac atcttaaaca aagaatgcaa
0211 aatgctacta actttctcgc gcgtctgatg tcatgtaaaa atcaggcatc cagatcgcat cacagtacgg
0281 ctaaatcagc taaaagtgcc ttatcatcag attcaggtga tggtagtgac cccgaccccg agcccgaaac
0351 gtttccttct gccttcatta ctacccctac taattcaata atgcttaaag ctttctttgc caatatctca
0421 atcactgagg tggcaaaatg agcgcattca aactcccgga tacatctcaa tcacagctca tttcaacagc
0491 tgagttagct aaaatcatta gctacaaatc tcaaaccatt cgtaaatggc t
|
