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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
yagK
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yagK
Search strains by all related name:
yagK b0277 ECK0276 JW0271
|
General information (Go to Linear View: )
|
|
Gene Name
|
yagK
|
|
Alternative name
|
b0277,ECK0276,JW0271
|
|
Location, Length
|
291,546 - 292,172
(
-
)
;
6.27
min
;
627
(bp) ,
208
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
CP4-6 prophage region; ECK0276:JW0271:b0277
|
|
Function
|
|
|
PID
|
85674421
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAGK_ECOLI
(
P77657
;
Q2MCE5
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein yagK;
|
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- Synonyms
|
|
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- Gene name
|
Name=yagK; OrderedLocusNames=b0277, JW0271;
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Homology Analysis
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|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
CP4-6 prophage; conserved protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKTYQGTHGV HILEYQSKIN KLLCYLTNRY PRLIAVRVDL HYPKIVDNGD NICCFPNLEP GVISRMRESL
0071 RAKLEADRTR KVREDKRIYR CPLFIIWAKE YSESGKCHYH ICLLFNKDAY YHLGDYDQDD NLRGMITGAW
0141 YSALRLERDD HPGLVHFPEN CKYVLDTNST DFQQNYQALL TRLDYLTKVE SKVFGEGDRN FGCSQIEL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 taccagtata taccgacaac agtgaccagg
-070 aatagccctg cctgtatggc atccctgtac ggtctgctat agaccgtagg accaaataca ggtatatatt
0001 atgaaaacat atcaaggtac tcatggagta catatcctcg aatatcagag taagattaat aaattattat
0071 gttatttgac taaccggtat cctaggttaa ttgctgtacg tgtcgatctc cactatccca aaatagttga
0141 taacggtgac aatatctgtt gcttccctaa cctggaacct ggggtgatat cccggatgcg tgaatccctc
0211 agagctaagc tggaggctga ccgtacccgt aaggtgcgtg aggataaacg catttaccgt tgccctttat
0281 ttattatatg ggcgaaagag tattctgaat caggtaaatg ccactatcac atttgcctgt tgttcaacaa
0351 agacgcttac taccacctcg gggattacga tcaggacgat aaccttagag ggatgatcac aggagcctgg
0421 tacagcgccc tgagactgga gagagacgat caccctggtc tggtccattt tcctgaaaac tgtaagtatg
0491 tgctagacac caatagtact gacttccagc agaactacca ggcgctgtta acccgactgg actacctgac
0561 caaagttgaa agcaaagtgt ttggtgaagg agaccgtaac ttcggctgta gccaaatcga actgtaagtc
0631 ggtaatggcc ttctcagtga gaaggcctta tttgtattgt ttcaaaaaat tactaaaatg cagtttcgtt
0701 acgcaatttt ctatagatta ctgatag
|
