|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yagI
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yagI
Search strains by all related name:
yagI b0272 ECK0273 JW0265
|
General information (Go to Linear View: )
|
|
Gene Name
|
yagI
|
|
Alternative name
|
b0272,ECK0273,JW0265
|
|
Location, Length
|
287,628 - 288,386
(
-
)
;
6.19
min
;
759
(bp) ,
252
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
CP4-6 prophage region; ECK0273:JW0265:b0272
|
|
Function
|
|
|
PID
|
85674416
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAGI_ECOLI
(
P77300
;
Q2MCF0
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator yagI;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yagI; OrderedLocusNames=b0272, JW0265;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
CP4-6 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MPIIQSVERA LQILDLFNEQ ATELKITDIS KLMGLSKSTL HSLLKTLQLH GYIDQNPENG KYRLGMKLVE
0071 RGHFVVGSID IRQKAKGWLT ELSRRTGQTT HLGILDGREG VYIEKIEGKL AAIAYSRIGR RLPVHATAIG
0141 KVLIAWLGEA ELNALLEGYQ YTTFTPATLA SREALMSALA QTREQGYALD SEENEQGVRC VAVPVWNHES
0211 RVIAALSLST LTSRVDDAEL ANFREQLQQA GLALSRALGY PA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctcccacagg gagagggaga acaccggctc
-070 catttcattg atttttcatc ccgaaaaagg tacgttttcg ccttaattcc agcgtggaca tgccagcatt
0001 atgccgatta ttcagtctgt tgaacgtgcg ttgcagatcc tcgacctgtt caacgagcag gccaccgagc
0071 ttaagatcac cgacatcagc aaactgatgg ggctgagcaa gagtaccctc cactcgctgc taaaaaccct
0141 gcagcttcac ggctatatcg atcagaaccc ggagaacggc aagtatcgcc tcggcatgaa gctggtcgag
0211 cgcggccatt ttgtcgtggg ctccatcgat attcggcaga aggcaaaagg ctggctgacg gagctgtccc
0281 ggcggaccgg gcagaccacc catctgggga tcctggacgg gcgtgaaggg gtctatatcg agaagattga
0351 aggcaagctg gccgccatcg cctattcacg catcggccgc cgcctgccgg tgcacgccac cgccatcggc
0421 aaggtgttga ttgcctggct gggcgaggcc gagctgaacg ccctgctgga gggctatcag tacactacct
0491 ttacgcccgc caccctcgcg tctcgcgaag ccttaatgag cgccctggcg cagacccgcg agcaaggcta
0561 cgccctggac agcgaagaga acgagcaggg cgtgcgctgc gtggcggtgc cggtgtggaa ccacgagtcc
0631 cgcgtcatcg ccgccctgag cctgtcgacg ctgacctccc gcgtggacga cgcggagctg gctaatttcc
0701 gcgagcagct tcagcaggcc gggctcgcgc tctcgcgcgc gctgggctac ccggcctgag ccgttagacc
0771 ggctcgtagg tgaagtagtc gaagtccgcg tagcagccgt cgccgctgat gtcctcgcag tgcaggccca
0841 caaacgcgcc ggtgaagaa
|
