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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
afuB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
afuB
Search strains by all related name:
afuB b0263 ECK0265 fbpB JW0255
|
General information (Go to Linear View: )
|
|
Gene Name
|
afuB
|
|
Alternative name
|
b0263,ECK0265,fbpB,JW0255
|
|
Location, Length
|
278,038 - 278,400
(
-
)
;
5.98
min
;
363
(bp) ,
120
(aa)
|
|
Product
|
predicted ferric trasnporter subunit
|
|
Note
|
CP4-6 prophage region; ECK0265:JW0255:b0263; membrane component of ABC superfamily
|
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Function
|
|
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PID
|
85674407
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
FBPB_ECOLI
(
P75681
;
Q9XB40
)
|
|
- Protein name
|
RecName: Full=Putative ferric transport system permease protein fbpB; Flags: Fragment;
|
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- Synonyms
|
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- Gene name
|
Name=fbpB; Synonyms=afuB; OrderedLocusNames=b0263, JW0255;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted ferric trasnporter subunit [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MESLPGQIDK SLDEASLSLR AGSLRTITHI LLPLLRPAIL SALIYSFVRA ITTVSAIVFL VTPDTRVATA
0071 YILNRVEDGE YGVAIAYGSI LIVVMLAIIF IFDWLIGESR TSRSKAKNQA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctggcacggc tgggacggaa gtcgctgtcg
-070 ttctcaaaat cggtggagca gcatgacaaa gtcatcgggc attatctgaa cataaaacac tatcaataag
0001 ttggagtcat taccgggcca aatcgataaa tcgctcgatg aagcctcact cagcctgcgc gccggttccc
0071 tgcgtaccat tacgcacatc ctgctgccgc tgctgcgccc ggcgatcctc tcggcgctga tttacagctt
0141 tgtgcgcgcc attaccaccg tcagcgccat tgtgttcctc gtcacgccgg atacccgcgt agcgacggct
0211 tacatcctca accgcgtgga agatggcgaa tacggtgtag cgattgccta cggttccatt ctgatcgtgg
0281 tgatgctggc gattattttc atctttgact ggctgatcgg tgaatcacgt acctcccgtt caaaagccaa
0351 aaaccaggcg taatggagcg cactatgact cagaaaaatt tcgttgaact gcgcaacgtc actaaacgat
0421 ttggcagtaa tacggtaatc gacaatatca acctcaccat ccc
|
