|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yafF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yafF
Search strains by all related name:
yafF b4503 ECK0219 JW0208
|
General information (Go to Linear View: )
|
|
Gene Name
|
yafF
|
|
Alternative name
|
b4503,ECK0219,JW0208
|
|
Location, Length
|
239,190 - 239,378
(
+
)
;
5.15
min
;
189
(bp) ,
62
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK0219:JW0208:b4503
|
|
Function
|
|
|
PID
|
4902954
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAFF_ECOLI
(
Q2EEP9
;
Q47678
)
|
|
- Protein name
|
RecName: Full=Putative uncharacterized protein yafF;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yafF; OrderedLocusNames=b4503, JW0208;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=H repeat-associated protein yhhI; AltName: Full=ORF-H
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
hypothetical protein [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNEDDYKIRR GNAAELFSGI RHIAINILTN EKVFKAGLRR KMRKAAMDRN YLASVLAGSG LS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATTCTATGGT TCTGCTGATT TAACCGCAGA
-070 GAAGTTCGCC ACAGCAATCC GAAACCACTG GCACGTGGAG AATAAGCTGC ACAGGCGTCT GGACGTGGTA
0001 atgaatgaag acgactacaa aataagaaga ggaaacgcag cagaattatt ttcagggata cggcacattg
0071 ctattaatat tttgacgaat gagaaggtat tcaaggcagg gttaagacgt aagatgcgaa aagcagccat
0141 ggacagaaac tacctggcgt cagtccttgc ggggagcggg ctttcgtagT AATACCCCGA CTCTCCCCGT
0211 CCTTAAACAC AACCCCCACT CACCACAACC TAAACTCATC CGCATCCTGC CATGCCGGAA ACTTTTCTCT
0281 ATATTCCCG
|
