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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
dnaQ
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Related strains
|
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Strains Search
|
Search strains by gene name:
dnaQ
Search strains by all related name:
dnaQ b0215 ECK0215 JW0205 mutD
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General information (Go to Linear View: )
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Gene Name
|
dnaQ
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Alternative name
|
b0215,ECK0215,JW0205,mutD
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Location, Length
|
236,067 - 236,798
(
+
)
;
5.08
min
;
732
(bp) ,
243
(aa)
|
|
Product
|
DNA polymerase III epsilon subunit
|
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Note
|
ECK0215:JW0205:b0215
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Function
|
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PID
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4902952
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
DPO3E_ECOLI
(
P03007
)
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- Protein name
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RecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7;
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- Synonyms
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- Gene name
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Name=dnaQ; Synonyms=mutD; OrderedLocusNames=b0215, JW0205;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
|
|
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nr
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BLAST
|
DNA polymerase III epsilon subunit [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
Genetics 1974;77:169-184
Selection for high mutation rates in chemostats.
Cox, E. C., and T. Gibson.
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| Sequences |
Amino acid
FASTA format
|
0001 MSTAITRQIV LDTETTGMNQ IGAHYEGHKI IEIGAVEVVN RRLTGNNFHV YLKPDRLVDP EAFGVHGIAD
0071 EFLLDKPTFA EVADEFMDYI RGAELVIHNA AFDIGFMDYE FSLLKRDIPK TNTFCKVTDS LAVARKMFPG
0141 KRNSLDALCA RYEIDNSKRT LHGALLDAQI LAEVYLAMTG GQTSMAFAME GETQQQQGEA TIQRIVRQAS
0211 KLRVVFATDE EIAAHEARLD LVQKKGGSCL WRA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGAACCATCG GTGAAAATTT CTACCTGTTT
-070 AAGCATCTCT GGTAGACTTC CTGTAATTGA ATCGAACTGT AAAACGACAA GTCTGACATA AATGACCGCT
0001 atgagcactg caattacacg ccagatcgtt ctcgataccg aaaccaccgg tatgaaccag attggtgcgc
0071 actatgaagg ccacaagatc attgagattg gtgccgttga agtggtgaac cgtcgcctga cgggcaataa
0141 cttccatgtt tatctcaaac ccgatcggct ggtggatccg gaagcctttg gcgtacatgg tattgccgat
0211 gaatttttgc tcgataagcc cacgtttgcc gaagtagccg atgagttcat ggactatatt cgcggcgcgg
0281 agttggtgat ccataacgca gcgttcgata tcggctttat ggactacgag ttttcgttgc ttaagcgcga
0351 tattccgaag accaatactt tctgtaaggt caccgatagc cttgcggtgg cgaggaaaat gtttcccggt
0421 aagcgcaaca gcctcgatgc gttatgtgct cgctacgaaa tagataacag taaacgaacg ctgcacgggg
0491 cattactcga tgcccagatc cttgcggaag tttatctggc gatgaccggt ggtcaaacgt cgatggcttt
0561 tgcgatggaa ggagagacac aacagcaaca aggtgaagca acaattcagc gcattgtacg tcaggcaagt
0631 aagttacgcg ttgtttttgc gacagatgaa gagattgcag ctcatgaagc ccgtctcgat ctggtgcaga
0701 agaaaggcgg aagttgcctc tggcgagcat aaATACCTGT GAAAGGCGCT AAAAATAGCG ACTTGGGCGA
0771 TTTTTGCAGC AAACGATTCA AAAGATGAGA AAAACCGTTG ACGAAGGTCG AGGCAATCCG TA
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