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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
rnhA
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Related strains
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Strains Search
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Search strains by gene name:
rnhA
Search strains by all related name:
rnhA b0214 cer dasF ECK0214 herA JW0204 rnh sdrA sin
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General information (Go to Linear View: )
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Gene Name
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rnhA
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Alternative name
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b0214,cer,dasF,ECK0214,herA,JW0204,rnh,sdrA,sin
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Location, Length
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235,535 - 236,002
(
-
)
;
5.07
min
;
468
(bp) ,
155
(aa)
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Product
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ribonuclease HI, degrades RNA of DNA-RNA hybrids
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Note
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ECK0214:JW0204:b0214
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Function
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PID
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4902951
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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RNH_ECOLI
(
P0A7Y4
;
P00647; Q8FKY5
)
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- Protein name
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RecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; AltName: Full=Ribonuclease H; Short=RNase H;
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- Synonyms
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- Gene name
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OrderedLocusNames=b0214, JW0204;
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MMBR References
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J Mol Biol. 1986;190(1):113-7.
DNA sequence and coding properties of mutD(dnaQ) a dominant Escherichia coli mutator gene.
Cox EC, Horner DL.
(
3023634
)
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| Sequences |
Amino acid
FASTA format
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0001 MLKQVEIFTD GSCLGNPGPG GYGAILRYRG REKTFSAGYT RTTNNRMELM AAIVALEALK EHCEVILSTD
0071 SQYVRQGITQ WIHNWKKRGW KTADKKPVKN VDLWQRLDAA LGQHQIKWEW VKGHAGHPEN ERCDELARAA
0141 AMNPTLEDTG YQVEV
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 atcgagaacg atctggcgtg taattgcagt
-070 gctcatagcg gtcatttatg tcagacttgt cgttttacag ttcgattcaa ttacaggaag tctaccagag
0001 atgcttaaac aggtagaaat tttcaccgat ggttcgtgtc tgggcaatcc aggacctggg ggttacggcg
0071 ctattttacg ctatcgcgga cgcgagaaaa cctttagcgc tggctacacc cgcaccacca acaaccgtat
0141 ggagttgatg gccgctattg tcgcgctgga ggcgttaaaa gaacattgcg aagtcatttt gagtaccgac
0211 agccagtatg tccgccaggg tatcacccag tggatccata actggaaaaa acgtggctgg aaaaccgcag
0281 acaaaaaacc agtaaaaaat gtcgatctct ggcaacgtct tgatgctgca ttggggcagc atcaaatcaa
0351 atgggaatgg gttaaaggcc atgccggaca cccggaaaac gaacgctgtg atgaactggc tcgtgccgcg
0421 gcgatgaatc ccacactgga agatacaggc taccaagttg aagtttaagc ctgtggttta cgacattgcc
0491 gggtggctcc aaccgcctgg cgaattcgtg gcttgttttt actctgtttc atcggattta gcgttaaagg
0561 aatagtcc
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