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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaeR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaeR
Search strains by all related name:
yaeR b0187 ECK0186 JW0182
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaeR
|
|
Alternative name
|
b0187,ECK0186,JW0182
|
|
Location, Length
|
211,877 - 212,266
(
+
)
;
4.56
min
;
390
(bp) ,
129
(aa)
|
|
Product
|
predicted lyase
|
|
Note
|
ECK0186:JW0182:b0187
|
|
Function
|
|
|
PID
|
4902928
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAER_ECOLI
(
P52096
;
P75669
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein yaeR;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaeR; OrderedLocusNames=b0187, JW0182;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted lyase [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLGLKQVHHI AIIATDYAVS KAFYCDILGF TLQSEVYREA RDSWKGDLAL NGQYVIELFS FPFPPERPSR
0071 PEACGLRHLA FSVDDIDAAV AHLESHNVKC ETIRVDPYTQ KRFTFFNDPD GLPLELYEQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAGACGGCGT TTACCGCGTA CGAGTCCTAA
-070 AAATGGCGGG ATAACTTGCC AGAGCGGCTT CCGGGCGAGT AACGTGCTGT TAACAAATAA AGGAGACGTT
0001 atgctgggtt taaaacaggt tcaccatatt gcgattattg cgacggatta tgcggtgagc aaagctttct
0071 actgcgatat tcttggtttc acgctgcaaa gcgaagtcta tcgcgaagcg cgcgactcat ggaaagggga
0141 tttggcgctt aatgggcaat atgtgattga gcttttctca tttccgttcc cgccggaacg acccagccga
0211 ccggaagctt gcggtctgcg tcatctggct tttagcgttg atgacatcga tgcggcagtg gcgcaccttg
0281 aaagccataa cgtgaagtgt gaaaccatcc gtgtcgatcc atacacgcaa aaacgcttca ccttctttaa
0351 cgatccggac gggctgccgt tggaactgta tgagcagtaa GGCTTGTCAT CGCCGCATTT GCCCGGTAAC
0421 GTGCCGGGCA TTGCTACTGT AAAATCGCAC CATCATGACA CTCACGCTCA ATAGACAACT TCTCACCTCA
|
