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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rnhB
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
rnhB
Search strains by all related name:
rnhB b0183 ECK0182 JW0178
|
General information (Go to Linear View: )
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Gene Name
|
rnhB
|
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Alternative name
|
b0183,ECK0182,JW0178
|
|
Location, Length
|
204,493 - 205,089
(
+
)
;
4.40
min
;
597
(bp) ,
198
(aa)
|
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Product
|
ribonuclease HII, degrades RNA of DNA-RNA hybrids
|
|
Note
|
ECK0182:JW0178:b0183
|
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Function
|
|
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PID
|
85674372
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RNH2_ECOLI
(
P10442
;
P78265
)
|
|
- Protein name
|
RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4;
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- Synonyms
|
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- Gene name
|
Name=rnhB; OrderedLocusNames=b0183, JW0178;
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| Sequences |
Amino acid
FASTA format
|
0001 MIEFVYPHTQ LVAGVDEVGR GPLVGAVVTA AVILDPARPI AGLNDSKKLS EKRRLALYEE IKEKALSWSL
0071 GRAEPHEIDE LNILHATMLA MQRAVAGLHI APEYVLIDGN RCPKLPMPAM AVVKGDSRVP EISAASILAK
0141 VTRDAEMAAL DIVFPQYGFA QHKGYPTAFH LEKLAEHGAT EHHRRSFGPV KRALGLAS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAACCAGCCA CGCGATGCAC GATACCTTCC
-070 GTGAACTGCA TCAGCAGATC CGCTGCAATG CCGATGAGCA GGCGGCACAA GCCGTTCTGG AGTTAGCACA
0001 atgatcgaat ttgtttatcc gcacacgcag ctggttgcgg gtgtggatga agtcggacgc gggccgttag
0071 ttggcgcggt cgtcaccgct gcggtgatcc ttgacccggc gcgcccgatt gccgggctga atgattccaa
0141 aaagctgagc gaaaaacgcc gtctggcgct ctatgaagag atcaaagaga aagcgttgag ctggagtctg
0211 ggccgcgcgg aaccccacga aatcgacgag ctgaacattc ttcatgcgac catgctggcg atgcagcgtg
0281 ccgtcgctgg gctgcatatt gcgccggaat atgtgttgat tgatggtaac cgctgcccga aattaccgat
0351 gcctgcgatg gctgtggtga aaggcgatag ccgcgtaccg gaaatcagtg ccgcgtctat cctggcgaaa
0421 gtgacgcgtg acgccgaaat ggcggcgctg gatattgttt tcccgcaata tggttttgcc caacacaaag
0491 ggtacccaac cgcttttcat ctggaaaaac tggctgaaca cggcgcgacc gaacaccatc ggcgcagctt
0561 tgggcctgtc aaacgcgcac tgggacttgc gtcctgaTTC TTGTGTCGAG ATTAAGTAAA CCGGAATCTG
0631 AAGATGTCTG AACCACGTTT CGTACACCTG CGGGTGCACA GCGACTACTC GATGATCGAT GGCCTGG
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