MG1655
W3110
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Gene Report : rpsB
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  rpsB
Related strains
     Strains Search Search strains by gene name:  rpsB   Search strains by all related name:  rpsB b0169 ECK0168 JW0164

General information  (Go to Linear View:)
 Gene Name rpsB  
 Alternative name b0169,ECK0168,JW0164  
 Location, Length 189,874 - 190,599 (  +  ) ;   4.09 min ; 726 (bp) ,   241 (aa) Go to Linear View
 Product 30S ribosomal subunit protein S2  
 Note ECK0168:JW0164:b0169  
 Function  
 PID 21239023  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RS2_ECOLI ( P0A7V0 ; P02351; Q9R2E5 )
    -  Protein name RecName: Full=30S ribosomal protein S2;  
    -  Synonyms  
    -  Gene name Name=rpsB; OrderedLocusNames=b0169, JW0164;  

 Linear View
View Location
   180.0  –  205.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=30S ribosomal protein S2  
         PSI-BLAST RecName: Full=30S ribosomal protein S2
    nr
         BLAST 30S ribosomal protein S2 [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc rpsB 

MMBR References
Nucleic Acids Res. 1981;9:4163-4172
Organization and nucleotide sequence of a new ribosomal operon in Escherichia coli containing the genes for ribosomal protein S2 and elongation factor Ts.
An, G., D. S. Bendiak, L. A. Mamelak, and J. D. Friesen.

Sequences
Amino acid
FASTA format
0001 MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELNKI ASRKGKILFV 
0071 GTKRAASEAV KDAALSCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ SQDGTFDKLT KKEALMRTRE 
0141 LEKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG IPVFAIVDTN SDPDGVDFVI PGNDDAIRAV 
0211 TLYLGAVAAT VREGRSQDLA SQAEESFVEA E

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             CAACACACAC GTATCGGCAC ATATTCCGGG 
-070 GTGCCCTTTG GGGTCGGTAA TATGGGATAC GTGGAGGCAT AACCCCAACT TTTATATAGA GGTTTTAATC 
0001 atggcaactg tttccatgcg cgacatgctc aaggctggtg ttcacttcgg tcaccagacc cgttactgga 
0071 acccgaaaat gaagccgttc atcttcggtg cgcgtaacaa agttcacatc atcaaccttg agaaaactgt 
0141 accgatgttc aacgaagctc tggctgaact gaacaagatt gcttctcgca aaggtaaaat ccttttcgtt 
0211 ggtactaaac gcgctgcaag cgaagcggtg aaagacgctg ctctgagctg cgaccagttc ttcgtgaacc 
0281 atcgctggct gggcggtatg ctgactaact ggaaaaccgt tcgtcagtcc atcaaacgtc tgaaagacct 
0351 ggaaactcag tctcaggacg gtactttcga caagctgacc aagaaagaag cgctgatgcg cactcgtgag 
0421 ctggagaaac tggaaaacag cctgggcggt atcaaagaca tgggcggtct gccggacgct ctgtttgtaa 
0491 tcgatgctga ccacgaacac attgctatca aagaagcaaa caacctgggt attccggtat ttgctatcgt 
0561 tgataccaac tctgatccgg acggtgttga cttcgttatc ccgggtaacg acgacgcaat ccgtgctgtg 
0631 accctgtacc tgggcgctgt tgctgcaacc gtacgtgaag gccgttctca ggatctggct tcccaggcgg 
0701 aagaaagctt cgtagaagct gagtaaTAAG GCTTGATAAC TCCCCCAAAA TAGTTCGAGT TGCAGAAAGG 
0771 CGGCAAGCTC GAGAATTCCC GGGAGCTTAC ATCAGTAAGT GACCGGGATG AGCGAG