MG1655
W3110
Search for
  Japanese | English
Gene Report : dapD
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  dapD
Related strains
     Strains Search Search strains by gene name:  dapD   Search strains by all related name:  dapD b0166 ECK0164 JW0161 ssa

General information  (Go to Linear View:)
 Gene Name dapD  
 Alternative name b0166,ECK0164,JW0161,ssa  
 Location, Length 185,123 - 185,947 (  -  ) ;   3.98 min ; 825 (bp) ,   274 (aa) Go to Linear View
 Product 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase  
 Note ECK0164:JW0161:b0166  
 Function  
 PID 21239021  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) DAPD_ECOLI ( P0A9D8 ; P03948 )
    -  Protein name RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; EC=2.3.1.117; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THP succinyltransferase; Short=Tetrahydropicolinate succinylase; Short=THDP succinyltransferase;  
    -  Synonyms  
    -  Gene name Name=dapD; OrderedLocusNames=b0166, JW0161;  

 Linear View
View Location
   175.0  –  200.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THP succinyltransferase; Short=Tetrahydropicolinate succinylase; Short=THDP succinyltransferase  
         PSI-BLAST RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THP succinyltransferase; Short=Tetrahydropicolinate succinylase; Short=THDP succinyltransferase
    nr
         BLAST 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc dapD 

MMBR References
J Biol Chem. 1984;259:14824-14828
Regulation of expression and nucleotide sequence of the Escherichia coli dapD gene.
Richaud, C., F. Richaud, C. Martin, C. Haziza, and J. C. Patte.

Sequences
Amino acid
FASTA format
0001 MQQLQNIIET AFERRAEITP ANADTVTREA VNQVIALLDS GALRVAEKID GQWVTHQWLK KAVLLSFRIN 
0071 DNQVIEGAES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN TVLMPSYVNI GAYVDEGTMV 
0141 DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED NCFIGARSEV VEGVIVEEGS VISMGVYIGQ 
0211 STRIYDRETG EIHYGRVPAG SVVVSGNLPS KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             taataacgag ttgcagcagg aagtgcatca 
-070 gcggttgaca gaggccctca atccaaacga taaagggtga tgtgtttact gatatgaaaa gagtttaaca 
0001 atgcagcagt tacagaacat tattgaaacc gcttttgaac gccgtgccga gatcacgcca gccaatgcag 
0071 acaccgttac ccgcgaagcg gtaaatcagg tgatcgccct gctggattcc ggcgcactgc gtgtagcgga 
0141 aaaaattgac ggtcagtggg tgacgcatca gtggttgaaa aaagcggtgc tgctctcttt ccgtattaat 
0211 gataatcagg tgatcgaagg ggcagaaagc cgctacttcg acaaagtgcc gatgaaattc gccgactacg 
0281 acgaagcacg tttccagaaa gaaggcttcc gcgttgtgcc accagcggcg gtacgtcagg gtgcgtttat 
0351 tgcccgtaac accgtgctga tgccgtctta cgtcaacatc ggcgcatatg ttgatgaagg caccatggtt 
0421 gatacctggg cgaccgtcgg ttcttgtgcg cagattggta aaaacgtcca cctttccggt ggcgtgggca 
0491 tcggcggcgt gctggaaccg ctgcaggcta acccaaccat cattgaagat aattgcttca tcggcgcgcg 
0561 ctctgaagtg gttgaagggg tgattgtcga agaaggttcc gtcatttcca tgggcgtata cattggtcag 
0631 agcacccgta tttacgaccg tgaaaccggc gaaatccact acggtcgcgt tccggcgggg tctgtggttg 
0701 tttcaggtaa tctgccgtca aaagatggca aatacagcct ctactgtgcg gttatcgtta agaaagttga 
0771 cgcgaaaact cgcggcaaag tcggcattaa cgaactgctg cgtaccatcg actaaaagta tgcacacggg 
0841 cagcacgacg ctgcccgatt tttttgcagg gatgagcgat gatttcacgc cgccgatttt tgcaggctac 
0911 tgccgcgacg atagc