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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ligT
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Related strains
|
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Strains Search
|
Search strains by gene name:
ligT
Search strains by all related name:
ligT b0147 ECK0146 JW5011 yadP
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General information (Go to Linear View: )
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Gene Name
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ligT
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Alternative name
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b0147,ECK0146,JW5011,yadP
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Location, Length
|
161,501 - 162,031
(
-
)
;
3.48
min
;
531
(bp) ,
176
(aa)
|
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Product
|
2'-5' RNA ligase
|
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Note
|
ECK0146:JW5011:b0147
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Function
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PID
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85674353
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
LIGT_ECOLI
(
P37025
;
Q8KJQ1
)
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- Protein name
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RecName: Full=2'-5'-RNA ligase; EC=6.5.1.-;
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- Synonyms
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- Gene name
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Name=ligT; Synonyms=yadP; OrderedLocusNames=b0147, JW5011;
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| Sequences |
Amino acid
FASTA format
|
0001 MSEPQRLFFA IDLPAEIREQ IIHWRATHFP PEAGRPVAAD NLHLTLAFLG EVSAEKEKAL SLLAGRIRQP
0071 GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR PFHPHITLLR DASEAVTIPP
0141 PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWALTQ
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gacggcagca acgggcaacg acgacacaaa
-070 acgctccaga gggttaacat tcttcgcgcc acattgtagc atcgcggtaa ttcataaccg agtgcctcac
0001 atgtctgaac cgcaacgtct gttctttgct atcgacttac ctgcagaaat ccgcgaacag attatccatt
0071 ggcgcgccac acacttccca cctgaggcgg gacgtccggt cgccgccgat aatttgcatc tgactctggc
0141 atttttaggc gaagtgagcg ccgagaaaga gaaggcgctt tctcttttag ccggacggat tcgtcaacct
0211 ggtttcacac tcacgcttga tgacgccgga caatggctgc gttcgcgtgt ggtgtggtta gggatgcgtc
0281 agccgccacg cggcttaatc cagctggcga atatgctccg ttcacaggct gcccgcagcg gttgttttca
0351 aagcaatcgt ccgtttcatc cacatattac cttattgcgc gacgccagcg aggcggtgac aatcccgccg
0421 ccaggtttta actggtcgta tgcggtgacg gagttcaccc tttacgcctc ctcgtttgcc cgtggacgca
0491 cacgctacac gccgctaaaa cgctgggcgc taacgcaata acaaggattg tcgcaatgga attttctccc
0561 cctctacagc gcgcgacgct aattcagcgt tacaaacgtt ttttagccga tgtgatcaca cccgatggtc
0631 g
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