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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yadB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yadB
Search strains by all related name:
yadB b0144 ECK0143 JW5892
|
General information (Go to Linear View: )
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|
Gene Name
|
yadB
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|
Alternative name
|
b0144,ECK0143,JW5892
|
|
Location, Length
|
159,186 - 160,112
(
-
)
;
3.43
min
;
927
(bp) ,
308
(aa)
|
|
Product
|
glutamyl-Q tRNA(Asp) synthetase
|
|
Note
|
ECK0143:JW5892:b0144
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Function
|
|
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PID
|
85674352
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
GLUQ_ECOLI
(
P27305
;
P75662
)
|
|
- Protein name
|
RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-;
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- Synonyms
|
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- Gene name
|
Name=gluQ; Synonyms=yadB; OrderedLocusNames=b0144, JW5892;
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Homology Analysis
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BLAST
|
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Bacteria
|
|
GTOP
|
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PDB
|
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PSI-BLAST
|
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SWISS-PROT
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|
BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
glutamyl-Q tRNA
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLPPYFLFKE MTDTQYIGRF APSPSGELHF GSLIAALGSY LQARARQGRW LVRIEDIDPP REVPGAAETI
0071 LRQLEHYGLH WDGDVLWQSQ RHDAYREALA WLHEQGLSYY CTCTRARIQS IGGIYDGHCR VLHHGPDNAA
0141 VRIRQQHPVT QFTDQLRGII HADEKLARED FIIHRRDGLF AYNLAVVVDD HFQGVTEIVR GADLIEPTVR
0211 QISLYQLFGW KVPDYIHLPL ALNPQGAKLS KQNHAPALPK GDPRPVLIAA LQFLGQQAEA HWQDFSVEQI
0281 LQSAVKNWRL TAVPESAIVN STFSNASC
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agccgatctg tgcatcgact gcaaaacgct
-070 ggctgaaatt cgcgaaaaac agatggctgg ctaattacag ccgttccatc acgtttacca caggcgggaa
0001 atgctcccgc cttatttttt gttcaaagag atgacagaca cacagtatat tggccgcttc gccccctctc
0071 cttccggcga gcttcatttt ggctctctga tcgccgcgct cggcagctat ttgcaggctc gcgcccggca
0141 aggtcgctgg ctggtacgca tagaagatat cgacccgcct cgtgaagttc ccggtgccgc agaaactatc
0211 ctgcgccagc tggaacatta cggtctgcac tgggacggcg atgttctctg gcaatcgcaa cgtcacgacg
0281 cctatcgtga agcactcgcc tggttacatg aacaaggact aagttattac tgcacctgta cgcgtgcgcg
0351 tattcaaagc attggcggta tttacgacgg tcattgccgg gtgttgcatc atggaccaga caacgccgca
0421 gtgcgtatcc gccagcagca tccggtcacg caatttactg accagctgcg cggcattatt cacgccgacg
0491 aaaaactggc acgggaagat tttatcattc atcgccgtga tgggttgttc gcctacaacc tggctgttgt
0561 ggttgatgat catttccagg gcgttacaga aatagtgcgt ggggctgatc tgattgaacc aacagtaagg
0631 caaatctcgc tgtaccagct ttttggctgg aaagtgccag attacattca tctgccgctg gcgcttaatc
0701 cacaaggcgc taaactttcc aagcagaatc atgcgcctgc gttgccgaaa ggcgatccac gcccggtact
0771 aatcgcggca cttcaatttc tggggcagca ggcagaagca cactggcagg atttcagcgt cgagcaaatc
0841 cttcagtcag ccgtcaaaaa ctggcggctt accgccgtgc ccgagtcggc aattgtaaat tcaacattct
0911 caaatgcgtc atgctgagct atgattagcc gctatttttt tgtcctgaat gatgtttgac actaccgagg
0981 tgtactattt ttacccgagt cgctaatttt tgccgcaagg tgctaag
|
