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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
pcnB
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Related strains
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Strains Search
|
Search strains by gene name:
pcnB
Search strains by all related name:
pcnB b0143 ECK0142 JW5808
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General information (Go to Linear View: )
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Gene Name
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pcnB
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Alternative name
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b0143,ECK0142,JW5808
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Location, Length
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157,729 - 159,126
(
-
)
;
3.39
min
;
1398
(bp) ,
465
(aa)
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Product
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poly(A) polymerase I
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Note
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ECK0142:JW5808:b0143
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Function
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PID
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85674351
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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PCNB_ECOLI
(
P0ABF1
;
P13685; P78050; Q8X910
)
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- Protein name
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RecName: Full=Poly(A) polymerase; Short=PAP; EC=2.7.7.19; AltName: Full=Plasmid copy number protein;
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- Synonyms
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- Gene name
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Name=pcnB; OrderedLocusNames=b0143, JW5808;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=Poly
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PSI-BLAST
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nr
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BLAST
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poly
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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Proc Natl Acad Sci U S A. 1992;89:10380-10384
Identification of the gene for an Escherichia coli poly(A) polymerase.
Cao, G. J., and N. Sarkar.
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| Sequences |
Amino acid
FASTA format
|
0001 MFTRVANFCR KVLSREESEA EQAVARPQVT VIPREQHAIS RKDISENALK VMYRLNKAGY EAWLVGGGVR
0071 DLLLGKKPKD FDVTTNATPE QVRKLFRNCR LVGRRFRLAH VMFGPEIIEV ATFRGHHEGN VSDRTTSQRG
0141 QNGMLLRDNI FGSIEEDAQR RDFTINSLYY SVADFTVRDY VGGMKDLKDG VIRLIGNPET RYREDPVRML
0211 RAVRFAAKLG MRISPETAEP IPRLATLLND IPPARLFEES LKLLQAGYGY ETYKLLCEYH LFQPLFPTIT
0281 RYFTENGDSP MERIIEQVLK NTDTRIHNDM RVNPAFLFAA MFWYPLLETA QKIAQESGLT YHDAFALAMN
0351 DVLDEACRSL AIPKRLTTLT RDIWQLQLRM SRRQGKRAWK LLEHPKFRAA YDLLALRAEV ERNAELQRLV
0421 KWWGEFQVSA PPDQKGMLNE LDEEPSPRRR TRRPRKRAPR REGTA
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggcaattgt aaattcaaca ttctcaaatg
-070 cgtcatgctg agctatgatt agccgctatt tttttgtcct gaatgatgtt tgacactacc gaggtgtact
0001 atttttaccc gagtcgctaa tttttgccgc aaggtgctaa gccgcgagga aagcgaggct gaacaggcag
0071 tcgcccgtcc acaggtgacg gtgatcccgc gtgagcagca tgctatttcc cgcaaagata tcagtgaaaa
0141 tgccctgaag gtaatgtaca ggctcaataa agcgggatac gaagcctggc tggttggcgg cggcgtgcgc
0211 gacctgttac ttggcaaaaa gccgaaagat tttgacgtaa ccactaacgc cacgcctgag caggtgcgca
0281 aactgttccg taactgccgc ctggtgggtc gccgtttccg tctggctcat gtaatgtttg gcccggagat
0351 tatcgaagtt gcgaccttcc gtggacacca cgaaggtaac gtcagcgacc gcacgacctc ccaacgcggg
0421 caaaacggca tgttgctgcg cgacaacatt ttcggctcca tcgaagaaga cgcccagcgc cgcgatttca
0491 ctatcaacag cctgtattac agcgtagcgg attttaccgt ccgtgattac gttggcggca tgaaggatct
0561 gaaggacggc gttatccgtc tgattggtaa cccggaaacg cgctaccgtg aagatccggt acgtatgctg
0631 cgcgcggtac gttttgccgc caaattgggt atgcgcatca gcccggaaac cgcagaaccg atccctcgcc
0701 tcgctaccct gctgaacgat atcccaccgg cacgcctgtt tgaagaatcg cttaaactgc tacaagcggg
0771 ctacggttac gaaacctata agctgttgtg tgaatatcat ctgttccagc cgctgttccc gaccattacc
0841 cgctacttca cggaaaatgg cgacagcccg atggagcgga tcattgaaca ggtgctgaag aataccgata
0911 cgcgtatcca taacgatatg cgcgtgaacc cggcgttcct gtttgccgcc atgttctggt acccactgct
0981 ggagacggca cagaagatcg cccaggaaag cggcctgacc tatcacgacg ctttcgcgct ggcgatgaac
1051 gacgtgctgg acgaagcctg ccgttcactg gcaatcccga aacgtctgac gacattaacc cgcgatatct
1121 ggcagttgca gttgcgtatg tcccgtcgtc agggtaaacg cgcatggaaa ctgctggagc atcctaagtt
1191 ccgtgcggct tatgacctgt tggccttgcg agctgaagtt gagcgtaacg ctgaactgca gcgtctggtg
1261 aaatggtggg gtgagttcca ggtttccgcg ccaccagacc aaaaagggat gctcaacgag ctggatgaag
1331 aaccgtcacc gcgtcgtcgt actcgtcgtc cacgcaaacg cgcaccacgt cgtgagggta ccgcatgaca
1401 gtggcgtata ttgccatagg cagcaatctg gcctctccgc tggagcaggt caatgctgcc ctgaaagcat
1471 taggcgatat ccctgaaagc cacattct
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