|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
kch
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
kch
Search strains by all related name:
kch b1250 ECK1244 JW1242
|
General information (Go to Linear View: )
|
|
Gene Name
|
kch
|
|
Alternative name
|
b1250,ECK1244,JW1242
|
|
Location, Length
|
1,310,730 - 1,311,983
(
-
)
;
28.21
min
;
1254
(bp) ,
417
(aa)
|
|
Product
|
voltage-gated potassium channel
|
|
Note
|
ECK1244:JW1242:b1250
|
|
Function
|
|
|
PID
|
1742039
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
KCH_ECOLI
(
P31069
;
P94716; P94717; P94723; P94729; P97198; P97225
)
|
|
- Protein name
|
RecName: Full=Putative potassium channel protein;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=kch; OrderedLocusNames=b1250, JW1242;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=Putative potassium channel protein
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
voltage-gated potassium channel [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MSHWATFKQT ATNLWVTLRH DILALAVFLN GLLIFKTIYG MSVNLLDIFH IKAFSELDLS LLANAPLFML
0071 GVFLVLNSIG LLFRAKLAWA ISIILLLIAL IYTLHFYPWL KFSIGFCIFT LVFLLILRKD FSHSSAAAGT
0141 IFAFISFTTL LFYSTYGALY LSEGFNPRIE SLMTAFYFSI ETMSTVGYGD IVPVSESARL FTISVIISGI
0211 TVFATSMTSI FGPLIRGGFN KLVKGNNHTM HRKDHFIVCG HSILAINTIL QLNQRGQNVT VISNLPEDDI
0281 KQLEQRLGDN ADVIPGDSND SSVLKKAGID RCRAILALSD NDADNAFVVL SAKDMSSDVK TVLAVSDSKN
0351 LNKIKMVHPD IILSPQLFGS EILARVLNGE EINNDMLVSM LLNSGHGIFS DNDELETKAD SKESAQK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aagtcatcta ctattgttta acacattcac
-070 gcgctgcatg tatgttcaga aaatgtgcac gctaagataa ttaaacaaaa ttgtggttac agaggtatca
0001 gtgagtcact gggctacatt caaacaaaca gcaacaaatt tatgggtgac ccttcggcac gacattctcg
0071 cgctggccgt ctttttaaat ggattgctta tttttaaaac aatctatggt atgtcggtca atttgcttga
0141 tattttccat atcaaagcat tttcagagtt ggatctctcc ttgctggcaa acgccccact ctttatgctc
0211 ggcgtctttc ttgtcctgaa ctccattggc ttactgttcc gggcaaagct cgcatgggca atcagtatca
0281 ttttgttgtt gatagcgcta atttacaccc tgcattttta tccctggctg aaatttagta ttggattttg
0351 catttttacg ctggtgtttt tgctgatact gcgcaaagac ttctcccaca gtagcgccgc agccgggaca
0421 atttttgcat ttattagttt cacgacatta ctgttttact caacctacgg tgcgctttat ttaagcgaag
0491 gttttaatcc gcgaatagaa agtttgatga ccgcgttcta tttttcgata gaaaccatgt caaccgtcgg
0561 ctatggcgat attgtccctg tttctgaatc agcacgattg ttcactattt cggtcattat ttccggcatt
0631 accgtttttg ccacatctat gacctcaatt tttggtccgc ttatccgcgg gggattcaac aaacttgtaa
0701 aaggaaacaa tcatacaatg catcgtaaag atcattttat tgtttgcgga cattcgattc tcgccatcaa
0771 tacgatcctg caactgaatc aacgcggaca aaacgtaacg gttatcagca acttgcctga agatgatatc
0841 aagcaacttg agcaacgctt aggcgataat gctgatgtta tccccggtga cagtaatgac agttctgtat
0911 taaagaaagc gggaatcgat cgttgccggg ccattctggc gctgagtgat aacgatgcag ataacgcgtt
0981 tgttgtactc tcggcaaaag atatgagcag tgatgtcaaa acagttctcg ccgtcagtga tagcaaaaac
1051 ctgaataaga ttaagatggt acatccggat atcattctct caccgcaact gtttggcagc gaaattctgg
1121 cgcgagtttt aaatggtgaa gagattaata atgatatgct cgtttcaatg ttgttgaact caggtcatgg
1191 tattttcagc gataacgatg aactagaaac gaaagctgac agtaaagaat cggcgcaaaa atagagttta
1261 aagacggaag agtaaactta ttgggcaccg caatggtgcc cagtacattt agatattgta gatcgcaaac
1331 aataacgagt tacgctgttt gttt
|
