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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
trmU
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Related strains
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Strains Search
|
Search strains by gene name:
trmU
Search strains by all related name:
trmU asuE b1132 b1133 ECK1118 ECK1119 hflD hslZ JW1119 JW5165 mnmA ycfB ycfC
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General information (Go to Linear View: )
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Gene Name
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trmU
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Alternative name
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asuE,b1132,b1133,ECK1118,ECK1119,hflD,hslZ,JW1119,JW5165,mnmA,ycfB,ycfC
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Location, Length
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1,194,244 - 1,195,350
(
-
)
;
25.70
min
;
1107
(bp) ,
368
(aa)
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Product
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tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
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Note
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ECK1119:JW1119:b1133
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Function
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PID
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4062697
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
MNMA_ECOLI
(
P25745
;
P75964
)
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- Protein name
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RecName: Full=tRNA-specific 2-thiouridylase mnmA; EC=2.8.1.-;
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- Synonyms
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- Gene name
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Name=mnmA; Synonyms=asuE, trmU, ycfB; OrderedLocusNames=b1133, JW1119;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=tRNA-specific 2-thiouridylase mnmA
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PSI-BLAST
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nr
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BLAST
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tRNA
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
|
0001 MSETAKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA VCDKLGIELH
0071 TVNFAAEYWD NVFELFLAEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG ADYIATGHYV RRADVDGKSR
0141 LLRGLDSNKD QSYFLYTLSH EQIAQSLFPV GELEKPQVRK IAEDLGLVTA KKKDSTGICF IGERKFREFL
0211 GRYLPAQPGK IITVDGDEIG EHQGLMYHTL GQRKGLGIGG TKEGTEEPWY VVDKDVENNI LVVAQGHEHP
0281 RLMSVGLIAQ QLHWVDREPF TGTMRCTVKT RYRQTDIPCT VKALDDDRIE VIFDEPVAAV TPGQSAVFYN
0351 GEVCLGGGII EQRLPLPV
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agatgattgg cgattttaac tggcctttta
-070 caaagggtgt catctaaaag gctgcgtgat agaatacgcc gccttgaagt tcaatgtcgt gagtgatcca
0001 atgtctgaaa ccgcaaaaaa agtaatcgtc ggcatgtccg gcggtgtcga ttcctccgtt tctgcctggc
0071 tgttgcaaca acagggatat caggtcgaag gcctgtttat gaagaactgg gaagaagacg acggtgagga
0141 atattgcaca gcggcagcgg atctggctga tgcccaggct gtctgcgaca agctcggcat tgaactgcac
0211 accgttaact ttgctgccga gtactgggac aacgtcttcg aactgttcct tgccgaatat aaagccggtc
0281 gcacgccgaa tccggatatt ctgtgcaaca aagagatcaa atttaaagcc ttcctcgaat ttgccgccga
0351 agatttaggt gccgattata tcgctaccgg tcattacgta cgtcgggccg atgtcgatgg caagagccgc
0421 ctgctgcgtg gtctggacag caataaagac cagagctact tcctttatac gctcagccat gagcagattg
0491 cgcaaagcct gttcccggtc ggcgaactgg aaaaaccgca ggtgcgtaag attgctgaag atcttggtct
0561 ggtcaccgcg aagaaaaaag actctaccgg catttgcttc attggcgaac gtaaattccg cgagttcctg
0631 ggccgttatc tcccggcgca accgggcaaa atcattaccg tcgatggcga tgaaattggt gagcaccagg
0701 ggctgatgta tcacactctc ggtcagcgta aaggtctggg tatcggtggc accaaagaag gtaccgaaga
0771 accgtggtat gtggtggaca aagacgtcga aaacaacatt ctggttgtcg ctcagggcca tgaacacccg
0841 cggctgatgt ctgtcgggtt gattgcccag cagttgcact gggtcgatcg cgaaccattc accggcacta
0911 tgcgttgcac ggtaaaaacc cgctatcgcc agaccgatat cccttgcacc gtcaaggcgc tggacgatga
0981 tcgcattgaa gtgattttcg atgaaccggt tgccgccgtg acgccgggcc agtctgccgt cttctataac
1051 ggtgaagtgt gcctcggtgg cggtattatt gagcagcgtc tgccgctgcc ggtctgatta ttatctttac
1121 ttaaaacaag gaagcagtga acgtggcaaa gaattactat gacatcaccc tcgccctggc cggtatttgt
1191 cagtcggcac gcctggt
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