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PEC Original Annotations
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|
Essentiality
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Class
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non-essential
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|
References (PMID)
|
Microbiology. 1996;142 (Pt 11):3219-30.
The purB gene of Escherichia coli K-12 is located in an operon.
Green SM, Malik T, Giles IG, Drabble WT.
(
8969519
)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
hflD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
hflD
Search strains by all related name:
hflD b1132 ECK1118 hslZ JW5165 ycfC
|
General information (Go to Linear View: )
|
|
Gene Name
|
hflD
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Alternative name
|
b1132,ECK1118,hslZ,JW5165,ycfC
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Location, Length
|
1,193,567 - 1,194,208
(
-
)
;
25.69
min
;
642
(bp) ,
213
(aa)
|
|
Product
|
predicted lysogenization regulator
|
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Note
|
ECK1118:JW5165:b1132
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Function
|
|
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PID
|
4062696
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YCFC_ECOLI
(
P25746
)
|
|
- Protein name
|
RecName: Full=UPF0274 protein ycfC; AltName: Full=ORF-23;
|
|
- Synonyms
|
|
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- Gene name
|
Name=ycfC; OrderedLocusNames=b1132, JW5165;
|
| Sequences |
Amino acid
FASTA format
|
0001 MAKNYYDITL ALAGICQSAR LVQQLAHQGH CDADALHVSL NSIIDMNPSS TLAVFGGSEA NLRVGLETLL
0071 GVLNASSRQG LNAELTRYTL SLMVLERKLS SAKGALDTLG NRINGLQRQL EHFDLQSETL MSAMAAIYVD
0141 VISPLGPRIQ VTGSPAVLQS PQVQAKVRAT LLAGIRAAVL WHQVGGGRLQ LMFSRNRLTT QAKQILAHLT
0211 PEL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tctataacgg tgaagtgtgc ctcggtggcg
-070 gtattattga gcagcgtctg ccgctgccgg tctgattatt atctttactt aaaacaagga agcagtgaac
0001 gtggcaaaga attactatga catcaccctc gccctggccg gtatttgtca gtcggcacgc ctggtgcaac
0071 aactcgctca ccaggggcat tgtgatgccg atgcgctaca cgtctcactc aacagtatta ttgatatgaa
0141 ccccagctcg acgctggcgg tttttggcgg tagcgaagcc aacctgcgcg tcgggctgga aaccctgctc
0211 ggcgtgctca atgccagcag tcgccagggc ttaaacgccg aattaacccg ctacacactc agcttgatgg
0281 tgcttgagcg caaactctcc tcagcgaaag gcgcgctcga cactctgggc aaccggatca acggcctgca
0351 acgccagctc gaacacttcg atttacagtc cgaaacgctg atgagcgcga tggctgctat ctatgttgat
0421 gtgattagcc cgcttggccc gcgcattcag gtcaccggtt cccctgctgt actgcaaagc ccacaagtgc
0491 aggcgaaagt tcgcgcaacc ctgctggcag gcattcgcgc cgccgtgctc tggcaccagg tcggcggcgg
0561 acgtctgcaa ctgatgtttt ctcgtaatcg cctgaccact caggcaaaac aaattcttgc tcatttaacc
0631 ccggagttgt gatctatgga attatcctca ctgaccgccg tttcccctgt cgatggacgc tacggcgata
0701 aagtcagcgc gctgcgcggg attttcagcg aatatggttt gc
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