MG1655
W3110
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Gene Report : ybeA
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  ybeA
Related strains
     Strains Search Search strains by gene name:  ybeA   Search strains by all related name:  ybeA b0636 ECK0629 JW0631 rlmH

General information  (Go to Linear View:)
 Gene Name ybeA  
 Alternative name b0636,ECK0629,JW0631,rlmH  
 Location, Length 668,670 - 669,137 (  -  ) ;   14.39 min ; 468 (bp) ,   155 (aa) Go to Linear View
 Product conserved hypothetical protein  
 Note ECK0629:JW0631:b0636  
 Function  
 PID 4062254  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RLMH_ECOLI ( P0A8I8 ; P05850 )
    -  Protein name RecName: Full=Ribosomal RNA large subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (pseudouridine-N3-)-methyltransferase rlmH; AltName: Full=23S rRNA m3Psi1915 methyltransferase;  
    -  Synonyms  
    -  Gene name Name=rlmH; Synonyms=ybeA; OrderedLocusNames=b0636, JW0631;  

 Linear View
View Location
   660.0  –  685.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Ribosomal RNA large subunit methyltransferase H; AltName: Full=rRNA  
        PSI-BLAST
    nr
         BLAST SPOUT methyltransferase superfamily protein [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc ybeA 

Sequences
Amino acid
FASTA format
0001 MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM LAAAGKNRIV 
0071 TLDIPGKPWD TPQLAAELER WKLDGRDVSL LIGGPEGLSP ACKAAAEQSW SLSALTLPHP LVRVLVAESL 
0141 YRAWSITTNH PYHRE

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             cgccgactgg attgtcgtgg atttgggcga 
-070 tgtgattgtc catgtcatgc aggaagagag ccgtcgcctg tatgaactgg aaaaactctg gagttaatgc 
0001 gtgaagctgc aacttgtcgc cgtgggaacg aaaatgccgg actgggtaca aaccggtttt accgagtacc 
0071 tgcgtcgttt tccgaaagat atgcccttcg agctgattga aattccggcc ggaaaacgcg gcaagaatgc 
0141 ggacatcaag cgcatactcg acaaagaggg tgagcagatg ttggcggccg caggcaaaaa ccgcattgtc 
0211 accctcgata ttccaggcaa gccctgggat acgccgcagt tagccgctga gctggaacgc tggaagctgg 
0281 atggtcgcga cgtcagtcta ctgattggcg ggcctgaagg gttgtcgcct gcctgtaaag cggcggctga 
0351 gcagagctgg tcgctgtcgg cgcttaccct cccccatccg ctggttcgcg tgctggtcgc agagagtctg 
0421 taccgggcgt ggagcatcac caccaaccat ccttatcacc gtgagtgata agggagcttt gagtagaaaa 
0491 cgcagcggat gaaactacag aactcttttc gcgactatac ggcagagtcc gcgctgtttg tgcgccgggc 
0561 gctggtcg