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PEC Original Annotations
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|
Essentiality
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Class
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non-essential
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References (PMID)
|
Mol Microbiol. 1996;20(3):621-32.
Analysis of nitrate regulatory protein NarL-binding sites in the fdnG and narG operon control regions of Escherichia coli K-12.
Darwin AJ, Li J, Stewart V.
(
8736541
)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
narH
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Related strains
|
|
Strains Search
|
Search strains by gene name:
narH
Search strains by all related name:
narH b1225 chlC ECK1219 JW1216
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General information (Go to Linear View: )
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Gene Name
|
narH
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|
Alternative name
|
b1225,chlC,ECK1219,JW1216
|
|
Location, Length
|
1,285,181 - 1,286,719
(
+
)
;
27.66
min
;
1539
(bp) ,
512
(aa)
|
|
Product
|
nitrate reductase 1, beta (Fe-S) subunit
|
|
Note
|
ECK1219:JW1216:b1225
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Function
|
|
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PID
|
1651621
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
NARH_ECOLI
(
P11349
)
|
|
- Protein name
|
RecName: Full=Respiratory nitrate reductase 1 beta chain; EC=1.7.99.4; AltName: Full=Nitrate reductase A subunit beta; AltName: Full=Quinol-nitrate oxidoreductase subunit beta;
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- Synonyms
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- Gene name
|
Name=narH; OrderedLocusNames=b1225, JW1216;
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Homology Analysis
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BLAST
|
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
nitrate reductase 1, beta
|
|
Pfam 27.0
(database updated :
2013-03
)
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|
Pfam
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|
| Sequences |
Amino acid
FASTA format
|
0001 MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGQ GFPTDWENQE KYKGGWIRKI
0071 NGKLQPRMGN RAMLLGKIFA NPHLPGIDDY YEPFDFDYQN LHTAPEGSKS QPIARPRSLI TGERMAKIEK
0141 GPNWEDDLGG EFDKLAKDKN FDNIQKAMYS QFENTFMMYL PRLCEHCLNP ACVATCPSGA IYKREEDGIV
0211 LIDQDKCRGW RMCITGCPYK KIYFNWKSGK SEKCIFCYPR IEAGQPTVCS ETCVGRIRYL GVLLYDADAI
0281 ERAASTENEK DLYQRQLDVF LDPNDPKVIE QAIKDGIPLS VIEAAQQSPV YKMAMEWKLA LPLHPEYRTL
0351 PMVWYVPPLS PIQSAADAGE LGSNGILPDV ESLRIPVQYL ANLLTAGDTK PVLRALKRML AMRHYKRAET
0421 VDGKVDTRAL EEVGLTEAQA QEMYRYLAIA NYEDRFVVPS SHRELAREAF PEKNGCGFTF GDGCHGSDTK
0491 FNLFNSRRID AIDVTSKTEP HP
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCGTAGGTTC TAACCGCGAT GAGTTTGTTG
-070 TAGTGCGTAA GATGAAGAAC ATTGACTGGT TAGATGGCGA AGGCAATGAC CAGGTACAGG AGAGCGTAAA
0001 atgaaaattc gttcacaagt cggcatggtg ctgaatctcg ataagtgcat cggctgccac acctgttcag
0071 ttacctgtaa aaacgtctgg accagccgtg aaggcgtgga atatgcgtgg ttcaacaacg tggaaaccaa
0141 gccgggccag ggcttcccga ctgactggga aaaccaggaa aaatacaaag gcggctggat ccgtaaaatc
0211 aacggcaaac tgcagccgcg catgggtaac cgtgccatgc tgctgggtaa aatcttcgct aacccgcatc
0281 tgccggggat cgacgattat tacgagccgt tcgattttga ctatcagaac ctgcataccg cgccggaagg
0351 cagcaaatcg cagccgattg cccgtccgcg ttcgctgatt accggggaac ggatggcgaa aatcgaaaaa
0421 gggccgaact gggaagatga cctgggcggt gagtttgaca aactggcgaa agacaagaac ttcgacaaca
0491 tccagaaggc gatgtatagc cagttcgaaa acaccttcat gatgtatttg ccgcgcctgt gcgaacactg
0561 cctgaacccg gcatgtgtgg cgacctgccc gagcggtgcg atttacaagc gtgaagaaga tggcatcgtc
0631 ctgatcgacc aggataaatg ccgtggctgg cgtatgtgca tcactggatg cccgtacaaa aaaatctact
0701 tcaactggaa gagcggtaag tctgagaagt gcatcttctg ctatccgcgt attgaagcgg gtcagccgac
0771 cgtgtgctca gaaacctgtg tcggtcgtat ccgttatctt ggcgtgctgt tgtacgatgc cgacgctatt
0841 gaacgtgcag ccagcaccga gaacgagaaa gatctttacc agcgtcagct ggacgtgttc ctcgatccga
0911 acgatccgaa agtcatcgag caggcgatta aagacggtat tccgctgagc gttattgaag ccgcacagca
0981 gtcgccggtt tataaaatgg caatggaatg gaaactggcg ctgccgctgc atccggaata tcgcacactg
1051 ccgatggtct ggtacgtgcc gcctctgtct ccgattcagt ctgcagcaga cgcgggtgag ctgggtagca
1121 acggcattct gccagacgtc gaaagcctgc gtattccggt acagtatctg gcgaatctgc tgaccgccgg
1191 tgataccaaa ccggtactgc gcgcactgaa acgtatgctg gcgatgcgtc attacaaacg tgctgaaacc
1261 gttgacggta aagttgatac ccgtgcgctg gaagaggtcg gtctgaccga agcccaggca caggagatgt
1331 accgttatct ggcgattgct aactacgaag atcgctttgt ggtgccgagt agtcatcgtg aactggcacg
1401 ggaagccttc ccggagaaaa atggctgcgg ctttaccttt ggtgatggct gccacggttc agataccaaa
1471 ttcaatctgt tcaacagccg tcgtatcgat gccatcgatg tgaccagcaa aacggagccg catccatgaT
1541 CGAACTCGTG ATTGTATCGC GTCTCCTTGA ATATCCGGAT GCTGCCTTAT GGCAGCATCA ACAAGAGATG
1611 TTTGAGGCGA TTGCCGCGTC GAAAAATCT
|
