MG1655
W3110
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Gene Report : polB
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  polB
Related strains
     Strains Search Search strains by gene name:  polB   Search strains by all related name:  polB b0060 dinA ECK0061 JW0059

General information  (Go to Linear View:)
 Gene Name polB  
 Alternative name b0060,dinA,ECK0061,JW0059  
 Location, Length 63,429 - 65,780 (  -  ) ;   1.37 min ; 2352 (bp) ,   783 (aa) Go to Linear View
 Product DNA polymerase II  
 Note ECK0061:JW0059:b0060  
 Function  
 PID 85674307  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) DPO2_ECOLI ( P21189 ; Q8KMX7; Q8KMX8 )
    -  Protein name RecName: Full=DNA polymerase II; Short=Pol II; EC=2.7.7.7;  
    -  Synonyms  
    -  Gene name Name=polB; Synonyms=dinA; OrderedLocusNames=b0060, JW0059;  

 Linear View
View Location
   55.0  –  80.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=DNA polymerase II; Short=Pol II  
        PSI-BLAST
    nr
         BLAST DNA polymerase II [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc polB 

MMBR References
DNA Cell Biol. 1990;9(9):631-5.
Nucleotide sequence and deletion analysis of the polB gene of Escherichia coli.
Chen H, Sun Y, Stark TF, Beattie WG, Moses RE. ( 2261080 )

Sequences
Amino acid
FASTA format
0001 MAQAGFILTR HWRDTPQGTE VSFWLATDNG PLQVTLAPQE SVAFIPADQV PRAQHILQGE QGFRLTPLAL 
0071 KDFHRQPVYG LYCRAHRQLM NYEKRLREGG VTVYEADVRP PERYLMERFI TSPVWVEGDM HNGTIVNARL 
0141 KPHPDYRPPL KWVSIDIETT RHGELYCIGL EGCGQRIVYM LGPENGDASS LDFELEYVAS RPQLLEKLNA 
0211 WFANYDPDVI IGWNVVQFDL RMLQKHAERY RLPLRLGRDN SELEWREHGF KNGVFFAQAK GRLIIDGIEA 
0281 LKSAFWNFSS FSLETVAQEL LGEGKSIDNP WDRMDEIDRR FAEDKPALAT YNLKDCELVT QIFHKTEIMP 
0351 FLLERATVNG LPVDRHGGSV AAFGHLYFPR MHRAGYVAPN LGEVPPHASP GGYVMDSRPG LYDSVLVLDY 
0421 KSLYPSIIRT FLIDPVGLVE GMAQPDPEHS TEGFLDAWFS REKHCLPEIV TNIWHGRDEA KRQGNKPLSQ 
0491 ALKIIMNAFY GVLGTTACRF FDPRLASSIT MRGHQIMRQT KALIEAQGYD VIYGDTDSTF VWLKGAHSEE 
0561 EAAKIGRALV QHVNAWWAET LQKQRLTSAL ELEYETHFCR FLMPTIRGAD TGSKKRYAGL IQEGDKQRMV 
0631 FKGLETVRTD WTPLAQQFQQ ELYLRIFRNE PYQEYVRETI DKLMAGELDA RLVYRKRLRR PLSEYQRNVP 
0701 PHVRAARLAD EENQKRGRPL QYQNRGTIKY VWTTNGPEPL DYQRSPLDYE HYLTRQLQPV AEGILPFIED 
0771 NFATLMTGQL GLF

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             gcgcgaaggc atattacggg cagtaatgac 
-070 tgtataaaac cacagccaat caaacgaaac caggctatac tcaagcctgg ttttttgatg gattttcagc 
0001 gtggcgcagg caggttttat cttaacccga cactggcggg acaccccgca agggacagaa gtctccttct 
0071 ggctggcgac ggacaacggg ccgttgcagg ttacgcttgc accgcaagag tccgtggcgt ttattcccgc 
0141 cgatcaggtt ccccgcgctc agcatatttt gcagggtgaa caaggctttc gcctgacacc gctggcgtta 
0211 aaggattttc accgccagcc ggtgtatggc ctttactgtc gcgcccatcg ccaattgatg aattacgaaa 
0281 agcgcctgcg tgaaggtggc gttaccgtct acgaggccga tgtgcgtccg ccagaacgct atctgatgga 
0351 gcggtttatc acctcaccgg tgtgggtcga gggtgatatg cacaatggca ctatcgttaa tgcccgtctg 
0421 aaaccgcatc ccgactatcg tccgccgctc aagtgggttt ctatagatat tgaaaccacc cgccacggtg 
0491 agctgtactg catcggcctg gaaggctgcg ggcagcgcat cgtttatatg ctggggccgg agaatggcga 
0561 cgcctcctcg cttgatttcg aactggaata cgtcgccagc cgcccgcagt tgctggaaaa actcaacgcc 
0631 tggtttgcca actacgatcc tgatgtgatc atcggttgga acgtggtgca gttcgatctg cgaatgctgc 
0701 aaaaacatgc cgagcgttac cgtcttccgc tgcgtcttgg gcgcgataat agcgagctgg agtggcgcga 
0771 gcacggcttt aaaaacggcg tcttttttgc ccaggctaaa ggtcggctaa ttatcgacgg tatcgaggcg 
0841 ctgaaatccg cgttctggaa tttctcttca ttctcgctgg aaactgtcgc tcaggagcta ttaggcgaag 
0911 gaaaatctat cgataacccg tgggatcgaa tggacgaaat tgaccgccgt ttcgccgaag ataaacctgc 
0981 gctggcaact tataacctga aagattgcga gctggtgacg cagatcttcc acaaaactga aatcatgcca 
1051 tttttactcg aacgggcaac ggtgaacggc ctgccggtgg accgacacgg cggttcggtg gcggcatttg 
1121 gtcatctcta ttttccgcga atgcatcgcg ctggttatgt cgcgcctaat ctcggcgaag tgccgccgca 
1191 cgccagccct ggcggctacg tgatggattc acggccaggg ctttatgatt cagtgctggt gctggactat 
1261 aaaagcctgt acccgtcgat catccgcacc tttctgattg atcccgtcgg gctggtggaa ggcatggcgc 
1331 agcctgatcc agagcacagt accgaaggtt ttctcgatgc ctggttctcg cgagaaaaac attgcctgcc 
1401 ggagattgtg actaacatct ggcacgggcg cgatgaagcc aaacgccagg gtaacaaacc gctgtcgcag 
1471 gcgctgaaaa tcatcatgaa tgccttttat ggcgtgctcg gcaccaccgc ctgccgcttc ttcgatccgc 
1541 ggctggcatc gtcgatcacc atgcgtggtc atcagatcat gcggcaaacc aaagcgttga ttgaagcaca 
1611 gggctacgac gttatctacg gcgataccga ctcaacgttt gtctggctga aaggcgcaca ttcggaagaa 
1681 gaagcggcga aaatcggtcg tgcactggtg cagcacgtta acgcctggtg ggcggaaacg ctgcaaaaac 
1751 aacggctgac cagcgcatta gaactggagt atgaaaccca tttctgccgt tttctgatgc caaccattcg 
1821 cggagccgat accggcagta aaaagcgtta tgccggactg attcaggagg gcgacaagca gcggatggtg 
1891 tttaaagggc tggaaaccgt gcgcaccgac tggacgccgc tggcccagca gtttcagcag gagctatacc 
1961 tgcgcatctt ccgcaacgag ccatatcagg aatatgtacg cgaaaccatc gacaaactga tggcgggtga 
2031 actggatgcg cgactggttt accgtaaacg ccttcgccgt ccgctgagcg agtatcagcg taatgtgccg 
2101 cctcatgtac gcgccgctcg ccttgccgat gaagaaaacc aaaagcgtgg tcgccccttg caatatcaga 
2171 atcgcggcac cattaagtac gtatggacca ccaacggccc ggagccgctg gactaccaac gttcaccact 
2241 ggattacgaa cactatctga cccgccagct acaacccgtg gcggagggaa tactcccttt tattgaggat 
2311 aattttgcta cacttatgac cgggcaactt gggctatttt gagcaaaaaa aagagttcgc cagataccat 
2381 tttgatgcgt gacgaatgct ttgccatcca gtaccatagc gccctttcca ttcctggacc tgaataacac 
2451 ca