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PEC Original Annotations
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Essentiality
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Class
|
non-essential
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References (PMID)
|
|
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Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
ybbA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybbA
Search strains by all related name:
ybbA b0495 ECK0489 JW0484
|
General information (Go to Linear View: )
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|
Gene Name
|
ybbA
|
|
Alternative name
|
b0495,ECK0489,JW0484
|
|
Location, Length
|
518,957 - 519,643
(
+
)
;
11.17
min
;
687
(bp) ,
228
(aa)
|
|
Product
|
predicted transporter subunit
|
|
Note
|
ATP-binding component of ABC superfamily; ECK0489:JW0484:b0495
|
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Function
|
|
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PID
|
85674634
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBBA_ECOLI
(
P0A9T8
;
P31219; P77322; Q2MBT2
)
|
|
- Protein name
|
RecName: Full=Uncharacterized ABC transporter ATP-binding protein ybbA;
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- Synonyms
|
|
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- Gene name
|
Name=ybbA; OrderedLocusNames=b0495, JW0484;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
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BLAST
|
putative ABC transporter ATP-binding protein YbbA [Escherichia coli O157:H7 EDL933]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MPAENIVEVH HLKKSVGQGE HELSILTGVE LVVKRGETIA LVGESGSGKS TLLAILAGLD DGSSGEVSLV
0071 GQPLHNMDEE ARAKLRAKHV GFVFQSFMLI PTLNALENVE LPALLRGESS AESRNGAKAL LEQLGLGKRL
0141 DHLPAQLSGG EQQRVALARA FNGRPDVLFA DEPTGNLDRQ TGDKIADLLF SLNREHGTTL IMVTHDLQLA
0211 ARCDRCLRLV NGQLQEEA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CAGACATTCG ATACCCGGCG CTCAGGCTAT
-070 CACCCAGAAT CAATAACGTG TCCGCTGCGG CGGCACGGAA GGTTAACAGG ACCAGGAACA GGAAGGGCAA
0001 atgccagcgg aaaacattgt tgaagttcat catcttaaga agtccgtcgg tcagggggag catgaactct
0071 ccatcctcac cggagttgag ctggttgtca aacgtggcga gaccatcgca ctggtgggcg agtcgggatc
0141 gggtaagtca accttgctgg cgatcctcgc cgggcttgat gacggcagca gtggcgaagt gagtctggtg
0211 ggacaaccgc tacataatat ggacgaagaa gcgcgggcaa agttgcgcgc gaagcacgtc ggctttgttt
0281 ttcagtcatt tatgttaatt cctaccctta acgcgctgga aaacgtcgag cttccggctc tgctgcgcgg
0351 tgagagtagc gcggaaagtc gtaacggggc gaaagcgttg ctcgaacagt tagggctggg taaacgtctg
0421 gatcatcttc cggcacagct ttccggcggt gaacagcaac gagtggcgct ggcacgagcc tttaatggtc
0491 gacctgatgt gctgtttgcc gacgaaccca ccggcaacct tgaccgccag acgggcgata aaattgccga
0561 cctgctgttt tccctcaacc gtgaacatgg caccacgttg attatggtga cccacgacct gcaactggcg
0631 gcacgctgcg accgctgctt acggctggtg aacgggcagt tgcaggagga agcatgaTTG CACGTTGGTT
0701 CTGGCGCGAA TGGCGTTCGC CGTCGCTATT AATTGTCTGG CTGGCGCTAA GCCTGGCGGT GGCCTGCGTG
0771 CTGGCGCTGG GCAATAT
|
