|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
hipB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
hipB
Search strains by all related name:
hipB b1508 ECK1501 JW1501
|
General information (Go to Linear View: )
|
|
Gene Name
|
hipB
|
|
Alternative name
|
b1508,ECK1501,JW1501
|
|
Location, Length
|
1,593,890 - 1,594,156
(
-
)
;
34.30
min
;
267
(bp) ,
88
(aa)
|
|
Product
|
DNA-binding transcriptional regulator
|
|
Note
|
ECK1501:JW1501:b1508
|
|
Function
|
|
|
PID
|
1742468
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
HIPB_ECOLI
(
P23873
)
|
|
- Protein name
|
RecName: Full=HTH-type transcriptional regulator hipB;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=hipB; OrderedLocusNames=b1508, JW1501;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
|
MMBR References
|
J Bacteriol. 1994;176:4081-4091
Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis.
Black, D. S., B. Irwin, and H. S. Moyed.
|
| Sequences |
Amino acid
FASTA format
|
0001 MMSFQKIYSP TQLANAMKLV RQQNGWTQSE LAKKIGIKQA TISNFENNPD NTTLTTFFKI LQSLELSMTL
0071 CDAKNASPES TEQQNLEW
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gtagagcgga taagatgtgt ttccagattg
-070 acttatcctc actaaaggat aaaacttata atatcccctt aagcggataa acttgctgtg gacgtatgac
0001 atgatgagct ttcagaagat ctatagccca acgcaattgg cgaatgcaat gaaactggtt cgccagcaaa
0071 atggctggac gcagagcgag ctggcgaaaa aaattggtat taagcaggcg acgatttcca atttcgaaaa
0141 caaccctgac aataccacgc tcacgacatt ttttaagatt ttacagtcgc ttgaactctc aatgacgcta
0211 tgcgacgcga aaaatgcctc gccagaatca acagaacagc aaaatctgga gtggtaatgc ctaaacttgt
0281 cacttggatg aacaaccagc gggtaggcga gttaacgaag ttagccaacg gcgcgcacac ctttaagtat
0351 gcaccggagt ggttagc
|
