|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rcsF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rcsF
Search strains by all related name:
rcsF b0196 ECK0196 JW0192
|
General information (Go to Linear View: )
|
|
Gene Name
|
rcsF
|
|
Alternative name
|
b0196,ECK0196,JW0192
|
|
Location, Length
|
219,591 - 219,995
(
-
)
;
4.73
min
;
405
(bp) ,
134
(aa)
|
|
Product
|
predicted outer membrane protein, signal
|
|
Note
|
ECK0196:JW0192:b0196
|
|
Function
|
|
|
PID
|
85674380
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RCSF_ECOLI
(
P69411
;
P28633
)
|
|
- Protein name
|
RecName: Full=Protein rcsF;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=rcsF; OrderedLocusNames=b0196, JW0192;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted outer membrane protein, signal [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MRALPICLVA LMLSGCSMLS RSPVEPVQST APQPKAEPAK PKAPRATPVR IYTNAEELVG KPFRDLGEVS
0071 GDSCQASNQD SPPSIPTARK RMQINASKMK ANAVLLHSCE VTSGTPGCYR QAVCIGSALN ITAK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 caatttgtaa tatcattcag gacgggcgct
-070 tgcccgtctt gtcattttta caagctcctg attcaatatt gacgttttga tcatacattg aggaaatact
0001 atgcgtgctt taccgatctg tttagtagca ctcatgctaa gcggctgttc catgttaagc agatcccctg
0071 tcgaacccgt tcaaagcact gcaccccagc cgaaagcgga gcctgcaaaa ccgaaagcgc cgcgcgccac
0141 gccggtccga atttatacca atgcagaaga attagtcggc aaaccgttcc gcgatctcgg tgaagtcagt
0211 ggcgactctt gccaggcctc taatcaggac tctccgccga gcattccaac cgcacgtaag cggatgcaaa
0281 tcaacgcctc taaaatgaaa gccaatgctg tattactgca tagctgcgaa gtcaccagcg gtacgccagg
0351 ctgctatcgt caggctgtat gtatcggttc tgcgcttaac attacggcga aatgagcagt ttccagttcg
0421 agcaaatagg cgttattcgc tcgccctata aagaaaagtt cgccgttccg cgccagccag gtctggtaaa
0491 aagcgccaac ggcga
|
