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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
cynT
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Related strains
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Strains Search
|
Search strains by gene name:
cynT
Search strains by all related name:
cynT b0339 ECK0336 JW0330
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General information (Go to Linear View: )
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Gene Name
|
cynT
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Alternative name
|
b0339,ECK0336,JW0330
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Location, Length
|
358,023 - 358,682
(
+
)
;
7.71
min
;
660
(bp) ,
219
(aa)
|
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Product
|
carbonic anhydrase
|
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Note
|
ECK0336:JW0330:b0339
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Function
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PID
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85674481
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
CYNT_ECOLI
(
P0ABE9
;
P17582; P78278; Q2MC85
)
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- Protein name
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RecName: Full=Carbonic anhydrase 1; EC=4.2.1.1; AltName: Full=Carbonate dehydratase 1;
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- Synonyms
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- Gene name
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Name=cynT; OrderedLocusNames=b0339, JW0330;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=Carbonic anhydrase 1; AltName: Full=Carbonate dehydratase 1
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PSI-BLAST
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nr
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BLAST
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carbonic anhydrase [Escherichia coli O157:H7 EDL933]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
J Bacteriol. 1987;169(11):5224-30.
Characterization of high-level expression and sequencing of the Escherichia coli K-12 cynS gene encoding cyanase.
Sung YC, Anderson PM, Fuchs JA.
(
2822670
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MKEIIDGFLK FQREAFPKRE ALFKQLATQQ SPRTLFISCS DSRLVPELVT QREPGDLFVI RNAGNIVPSY
0071 GPEPGGVSAS VEYAVAALRV SDIVICGHSN CGAMTAIASC QCMDHMPAVS HWLRYADSAR VVNEARPHSD
0141 LPSKAAAMVR ENVIAQLANL QTHPSVRLAL EEGRIALHGW VYDIESGSIA AFDGATRQFV PLAANPRVCA
0211 IPLRQPTAA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TATAAGTAAA TCCAATGGAA CTCATCATAA
-070 ATGAGACTTT TACCTTATGA CAATCGGCGA GTAGTCTGCC TCTCATTCCA GAGACAGACA GAGGTTAACG
0001 gtgaaagaga ttattgatgg attccttaaa ttccagcgcg aggcatttcc gaagcgggaa gccttgttta
0071 aacagctggc gacacagcaa agcccgcgca cactttttat ctcctgctcc gacagccgtc tggtccctga
0141 gctggtgacg caacgtgagc ctggcgatct gttcgttatt cgcaacgcgg gcaatatcgt cccttcctac
0211 gggccggaac ccggtggcgt ttctgcttcg gtggagtatg ccgtcgctgc gcttcgggta tctgacattg
0281 tgatttgtgg tcattccaac tgtggcgcga tgaccgccat tgccagctgt cagtgcatgg accatatgcc
0351 tgccgtctcc cactggctgc gttatgccga ttcagcccgc gtcgttaatg aggcgcgccc gcattccgat
0421 ttaccgtcaa aagctgcggc gatggtacgt gaaaacgtca ttgctcagtt ggctaatttg caaactcatc
0491 catcggtgcg cctggcgctc gaagaggggc ggatcgccct gcacggctgg gtctacgaca ttgaaagcgg
0561 cagcatcgca gcttttgacg gcgcaacccg ccagtttgtg ccactggccg ctaatcctcg cgtttgtgcc
0631 ataccgctac gccaaccgac cgcagcgtaa CCTTATTTTT AAACCATCAG GAGTTCCACC ATGATTCAGT
0701 CACAAATTAA CCGCAATATT CGTCTTGATC TTGCCGATGC CATTTTGCTC AGCAAAGCTA
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