MG1655
W3110
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Gene Report : caiF
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  caiF
Related strains
     Strains Search Search strains by gene name:  caiF   Search strains by all related name:  caiF b0034 ECK0035 JW0033

General information  (Go to Linear View:)
 Gene Name caiF  
 Alternative name b0034,ECK0035,JW0033  
 Location, Length 34,300 - 34,695 (  +  ) ;   0.74 min ; 396 (bp) ,   131 (aa) Go to Linear View
 Product DNA-binding transcriptional activator  
 Note ECK0035:JW0033:b0034  
 Function  
 PID 85674291  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) CAIF_ECOLI ( P0AE58 ; P75622; Q2MCH0; Q47081 )
    -  Protein name RecName: Full=Transcriptional activatory protein caiF;  
    -  Synonyms  
    -  Gene name Name=caiF; OrderedLocusNames=b0034, JW0033;  

 Linear View
View Location
   25.0  –  50.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Transcriptional activatory protein caiF  
        PSI-BLAST
    nr
         BLAST conserved hypothetical protein [Escherichia sp. 1_1_43]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc caiF 

Sequences
Amino acid
FASTA format
0001 MCEGYVEKPL YLLIAEWMMA ENRWVIAREI SIHFDIEHSK AVNTLTYILS EVTEISCEVK MIPNKLEGRG 
0071 CQCQRLVKVV DIDEQIYARL RNNSREKLVG VRKTPRIPAV PLTELNREQK WQMMLSKSMR R

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             GTTGCATACT ATCGATATAT CCACAATTTT 
-070 AATATGGCCT TGTTTAATTG CTTCAAAACG AGTCATAGCC AGACTTTTAA TTTGTGAAAC TGGAGTTCGT 
0001 atgtgtgaag gatatgttga aaaaccactc tacttgttaa tcgccgaatg gatgatggct gaaaatcggt 
0071 gggtgatagc aagagagatc tctattcatt tcgatattga acacagcaag gcggttaata ccctgactta 
0141 tattctgtcg gaagtcacag aaataagctg cgaagttaag atgatcccta ataagctgga agggcgggga 
0211 tgccagtgtc agcgactggt taaagtggtc gatatcgatg agcaaattta cgcgcgcctg cgcaataaca 
0281 gtcgggaaaa attagtcggt gtaagaaaga cgccgcgtat tcctgccgtt ccgctcacgg aacttaaccg 
0351 cgagcagaag tggcagatga tgttgtcaaa gagtatgcgt cgttaaTTTT ATCTCGTTGA TACCGGGCGT 
0421 CCTGCTTGCC AGATGCGATG TTGTAGCATC TTATCCAGCA ACCAGGTCGC ATCCGGCAAG ATCACCGTTT 
0491 AGGCGT