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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
glpR
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
glpR
Search strains by all related name:
glpR b3423 ECK3409 JW3386
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General information (Go to Linear View: )
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Gene Name
|
glpR
|
|
Alternative name
|
b3423,ECK3409,JW3386
|
|
Location, Length
|
4,079,810 - 4,080,568
(
+
)
;
87.81
min
;
759
(bp) ,
252
(aa)
|
|
Product
|
DNA-binding transcriptional repressor
|
|
Note
|
ECK3409:JW3386:b3423
|
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Function
|
|
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PID
|
85676619
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
GLPR_ECOLI
(
P0ACL0
;
P09392; Q2M787
)
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- Protein name
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RecName: Full=Glycerol-3-phosphate regulon repressor;
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- Synonyms
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- Gene name
|
Name=glpR; OrderedLocusNames=b3423, JW3386;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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|
|
nr
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BLAST
|
DNA-binding transcriptional repressor [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
Nucleic Acids Res. 1988;16(15):7732
Nucleotide sequence of the glpR gene encoding the repressor for the glycerol-3-phosphate regulon of Escherichia coli K12.
Choi YL, Kawase S, Nishida T, Sakai H, Komano T, Kawamukai M, Utsumi R, Kohara Y, Akiyama K.
(
3045764
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MKQTQRHNGI IELVKQQGYV STEELVEHFS VSPQTIRRDL NELAEQNLIL RHHGGAALPS SSVNTPWHDR
0071 KATQTEEKER IARKVAEQIP NGSTLFIDIG TTPEAVAHAL LNHSNLRIVT NNLNVANTLM VKEDFRIILA
0141 GGELRSRDGG IIGEATLDFI SQFRLDFGIL GISGIDSDGS LLEFDYHEVR TKRAIIENSR HVMLVVDHSK
0211 FGRNAMVNMG SISMVDAVYT DAPPPVSVMQ VLTDHHIQLE LC
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCGAACGGAG CACACATCGC CGGGTTAGCC
-070 GTGGGTTTAG CGATGGCTTT TGTTGATTCG CTCAATGCGC GAAAACGAAA ATAATTCCAG GGATTTATAA
0001 atgaaacaaa cacaacgtca caacggtatt atcgaactgg ttaaacagca gggttatgtc agtaccgaag
0071 agctggtaga gcatttctcc gtcagcccgc agactattcg ccgcgacctc aatgagctgg cggagcaaaa
0141 cctgatcctg cgccatcatg gcggtgcggc gctgccttcc agttcggtta acacgccgtg gcacgatcgc
0211 aaggccaccc agaccgaaga aaaagagcgc atcgcccgca aagtggcgga gcaaatcccc aatggctcga
0281 cgctgtttat cgatatcggc accacgccgg aagcggtagc gcacgcactg ctcaatcaca gcaatttgcg
0351 cattgtcacc aacaatctca acgttgctaa cacgttgatg gtaaaagaag attttcgcat cattctcgcc
0421 ggtggcgaat tacgcagccg cgatggcggg atcattggcg aagcgacgct cgattttatc tcccagttcc
0491 gccttgattt cggcattctg gggataagcg gcatcgatag cgacggctcg ctgctggagt tcgattacca
0561 cgaagttcgc accaaacgcg ccattattga gaactcgcgc cacgttatgc tggttgtcga tcactcgaaa
0631 tttggccgta acgcgatggt caatatgggc agcatcagca tggtagatgc cgtctacacc gacgccccgc
0701 cgccagtaag cgtgatgcag gtgctgacgg accaccatat tcaactggag ctgtgctgaT CCTGCACGGC
0771 TTCCCACGTC AGACCAAAAC GCGCCAGGTA TTTGCGTAGC CGATCCGCGT CATTGACGCT GGCTTTGCCC
0841 TGGCGCGAAA CGTCAAAAA
|
