|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yacF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yacF
Search strains by all related name:
yacF b0102 ECK0102 JW0099
|
General information (Go to Linear View: )
|
|
Gene Name
|
yacF
|
|
Alternative name
|
b0102,ECK0102,JW0099
|
|
Location, Length
|
111,856 - 112,599
(
-
)
;
2.41
min
;
744
(bp) ,
247
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK0102:JW0099:b0102
|
|
Function
|
|
|
PID
|
85674327
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YACF_ECOLI
(
P36680
;
P75645; Q8KJQ6; Q8KMZ7
)
|
|
- Protein name
|
RecName: Full=UPF0289 protein yacF;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yacF; OrderedLocusNames=b0102, JW0099;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=UPF0289 protein yacF
|
|
PSI-BLAST
|
RecName: Full=UPF0289 protein yacF
|
|
nr
|
|
BLAST
|
conserved protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MQTQVLFEHP LNEKMRTWLR IEFLIQQLTV NLPIVDHAGA LHFFRNVSEL LDVFERGEVR TELLKELDRQ
0071 QRKLQTWIGV PGVDQSRIEA LIQQLKAAGS VLISAPRIGQ FLREDRLIAL VRQRLSIPGG CCSFDLPTLH
0141 IWLHLPQAQR DSQVETWIAS LNPLTQALTM VLDLIRQSAP FRKQTSLNGF YQDNGGDADL LRLNLSLDSQ
0211 LYPQISGHKS RFAIRFMPLD TENGQVPERL DFELACC
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ataataacgg cgcaccggat gctatcgcat
-070 cggatgttgc ccgcctgcac gcacactatt tgcagcttgc gtcgcagttt gtctcacagg aaaaaccgta
0001 atgcagaccc aggtcctttt tgaacatcca ctaaatgaaa aaatgcgtac atggctgcgc attgagtttt
0071 tgattcagca actcaccgtt aatttaccca tcgttgacca cgctggcgcg ctgcatttct tccgtaatgt
0141 cagtgaatta ctggatgttt tcgagcgcgg cgaagtccgc actgagctgt tgaaagaact tgaccggcag
0211 caacgtaaac tccagacctg gattggcgtg cctggcgtgg accagagccg tattgaagca ttaattcagc
0281 agttaaaagc ggcggggagc gtattaattt ccgcgccgcg tatcgggcaa tttctgcgtg aagatcgttt
0351 gattgctctg gtgcgtcagc gactgagcat cccaggcggc tgttgcagct ttgatttacc tacattgcac
0421 atttggctgc atctacccca ggcgcagcgc gacagccagg tagaaacctg gattgccagc ctgaacccgc
0491 tcacccaggc acttaccatg gtgctggatt taattcgcca gtcggccccc ttccgtaaac aaaccagcct
0561 gaatggtttt tatcaggata acggtggcga tgccgacttg ctgcgcctga atctgtcgct cgattcacag
0631 ctttatccgc aaatttccgg acataagagc cgttttgcca ttcgttttat gccgctggac actgaaaacg
0701 gacaggtacc ggaacgtctg gatttcgaac tggcctgttg ctaaggagta aaaatgtcag aaactattac
0771 ggtgaattgc ccaacctgcg ggaaaacggt ggtgtggggt gaaatcagcc cgtttcggcc attttgctcc
0841 aaac
|
