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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
hfq
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Related strains
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Strains Search
|
Search strains by gene name:
hfq
Search strains by all related name:
hfq b4172 ECK4168 JW4130
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General information (Go to Linear View: )
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Gene Name
|
hfq
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Alternative name
|
b4172,ECK4168,JW4130
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Location, Length
|
4,404,968 - 4,405,276
(
+
)
;
94.81
min
;
309
(bp) ,
102
(aa)
|
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Product
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HF-I, host factor for RNA phage Q beta replication
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Note
|
ECK4168:JW4130:b4172
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Function
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PID
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85676923
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
HFQ_ECOLI
(
P0A6X3
;
O24728; P25521; Q2M6D3; Q47383
)
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- Protein name
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RecName: Full=Protein hfq; AltName: Full=Host factor-I protein; Short=HF-I; AltName: Full=HF-1;
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- Synonyms
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- Gene name
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Name=hfq; OrderedLocusNames=b4172, JW4130;
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MMBR References
|
Mol Microbiol. 1994;13(1):35-49.
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.
Tsui HC, Leung HC, Winkler ME.
(
7984093
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS TVVPSRPVSH
0071 HSNNAGGGTS SNYHHGSSAQ NTSAQQDSEE TE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCTATCGCAG GCTGAATGTG TACAATTGAG
-070 ACGTATCGTG CGCAATTTTT TCAGAATCGA AAGGTTCAAA GTACAAATAA GCATATAAGG AAAAGAGAGA
0001 atggctaagg ggcaatcttt acaagatccg ttcctgaacg cactgcgtcg ggaacgtgtt ccagtttcta
0071 tttatttggt gaatggtatt aagctgcaag ggcaaatcga gtcttttgat cagttcgtga tcctgttgaa
0141 aaacacggtc agccagatgg tttacaagca cgcgatttct actgttgtcc cgtctcgccc ggtttctcat
0211 cacagtaaca acgccggtgg cggtaccagc agtaactacc atcatggtag cagcgcgcag aatacttccg
0281 cgcaacagga cagcgaagaa accgaataaG GTTTCGGGCT GTTTTTTTAC ACGGGGAGCC AGCGATCCTG
0351 CGTTCCCCGC TGATCTATTT AGAGGGTTAT ACGCTTGTTT GACCGTTATG ATGCTGGTG
|
