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PEC Original Annotations
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Essentiality
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Class
|
non-essential
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|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
yaeF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaeF
Search strains by all related name:
yaeF b0193 ECK0193 JW5016 yaeK
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaeF
|
|
Alternative name
|
b0193,ECK0193,JW5016,yaeK
|
|
Location, Length
|
216,179 - 217,003
(
-
)
;
4.65
min
;
825
(bp) ,
274
(aa)
|
|
Product
|
predicted lipoprotein
|
|
Note
|
ECK0193:JW5016:b0193
|
|
Function
|
|
|
PID
|
85674378
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAEF_ECOLI
(
P37056
)
|
|
- Protein name
|
RecName: Full=Uncharacterized lipoprotein yaeF; Flags: Precursor;
|
|
- Synonyms
|
|
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- Gene name
|
Name=yaeF; Synonyms=yaeK; OrderedLocusNames=b0193, JW5016;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted lipoprotein [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MDKPKAYCRL FLPSFLLLSA CTVDISQPDP SATAVDAEAK TWAVKFQHQS SFTEQSIKEI TAPDLKPGDL
0071 LFSSSLGVTS FGIRVFSTSS VSHVAIFLGD NNVAEATGAG VQIVSLKKAM KHSDKLFVLR VPDLTPQQAT
0141 DITAFANKIK DSGYNYRGIV EFIPFMVTRQ MCSLNPFSED FRQQCVSGLA KAQLSSVGEG DKKSWFCSEF
0211 VTDAFAKAGH PLTLAQSGWI SPADLMHMRI GDVSAFKPET QLQYVGHLKP GIYIKAGRFV GLTR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agactggtga catcgtcgaa tatctggtga
-070 aacagattaa aggctgatgc cagaaagggt cctgaatttc agggcccttt ttttacatgg attgtataaa
0001 atggataaac caaaggcgta ctgccgcctg tttctcccca gctttctttt actttcggct tgtaccgttg
0071 atatcagcca gccagaccca tcagccacag cagtagatgc cgaggcaaaa acatgggctg tcaaattcca
0141 gcatcaaagc tctttcaccg aacaatcaat aaaagaaata acggcacctg atctcaaacc cggcgatttg
0211 ctgttctcct caagccttgg ggtaacctca tttggaatcc gcgtcttcag cacttcctct gtgagtcacg
0281 ttgcaatctt tctgggtgat aataacgttg cagaagcgac aggcgctggc gtccagatcg tttcccttaa
0351 aaaagcgatg aagcatagtg ataagctttt cgtcttacga gtcccggatc ttaccccgca acaagccaca
0421 gatatcaccg cgtttgccaa taaaatcaaa gatagcggtt ataactatcg cggcattgtc gaatttattc
0491 cctttatggt gactcgccag atgtgctcac tgaatccgtt ctccgaggat tttcgccaac agtgcgtcag
0561 cggcctggcg aaagcgcagt taagcagtgt gggcgaagga gacaaaaagt cgtggttttg ttcggaattt
0631 gtcacggatg cctttgccaa agccgggcat ccacttacac tggcgcaatc gggctggatt agccctgccg
0701 atctgatgca tatgcgtatt ggtgatgtct ctgcgtttaa gccagaaacg cagttacagt atgttgggca
0771 cctgaagcct gggatttata tcaaggcggg tcgctttgtt ggtttgaccc ggtgataaag taaatgcctt
0841 atccgcctta aggtatgagg ggggttgtag gcatgataag acgcgccagc gtcgcatcag gcgttgagca
0911 ccattgccgg atgcg
|
