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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
rplK
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
rplK
Search strains by all related name:
rplK b3983 ECK3974 JW3946 relC
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General information (Go to Linear View: )
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Gene Name
|
rplK
|
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Alternative name
|
b3983,ECK3974,JW3946,relC
|
|
Location, Length
|
3,457,806 - 3,458,234
(
-
)
;
74.42
min
;
429
(bp) ,
142
(aa)
|
|
Product
|
50S ribosomal subunit protein L11
|
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Note
|
ECK3974:JW3946:b3983
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Function
|
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PID
|
85676087
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RL11_ECOLI
(
P0A7J7
;
P02409; P76778; Q2M8R9
)
|
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- Protein name
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RecName: Full=50S ribosomal protein L11;
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- Synonyms
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- Gene name
|
Name=rplK; Synonyms=relC; OrderedLocusNames=b3983, JW3946;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=50S ribosomal protein L11
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PSI-BLAST
|
|
|
nr
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BLAST
|
hypothetical protein EcE24377A_4522 [Escherichia coli E24377A]
|
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Pfam 27.0
(database updated :
2013-03
)
|
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Pfam
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MMBR References
|
Mol Gen Genet. 1977;150(3):293-9.
A new technique for selection of sensitive and auxotrophic mutants of E. coli: isolation of a strain sensitive to an excess of one-carbon metabolites.
Danchin A.
(
321938
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MAKKVQAYVK LQVAAGMANP SPPVGPALGQ QGVNIMEFCK AFNAKTDSIE KGLPIPVVIT VYADRSFTFV
0071 TKTPPAAVLL KKAAGIKSGS GKPNKDKVGK ISRAQLQEIA QTKAADMTGA DIEAMTRSIE GTARSMGLVV
0141 ED
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atttcgcgcc ttttgttttt atgggccttg
-070 cccgtaaaac gattttttat atcacgggga gcctctcaga ggcgttatta cccaacttga ggaatttata
0001 atggctaaga aagtacaagc ctatgtcaag ctgcaggttg cagctggtat ggctaacccg agtccgccag
0071 taggtccggc tctgggtcag cagggcgtaa acatcatgga attctgcaaa gcgttcaacg caaaaactga
0141 ttccatcgaa aaaggtctgc cgattccggt agtaatcacc gtttacgctg accgttcttt cactttcgtt
0211 accaagaccc cgccggcagc agttctgctg aaaaaagcgg ctggtatcaa gtctggttcc ggtaagccga
0281 acaaagacaa agtgggtaaa atttcccgcg ctcagctgca ggaaatcgcg cagaccaaag ctgccgacat
0351 gactggtgcc gacattgaag cgatgactcg ctccatcgaa ggtactgcac gttccatggg cctggtagtg
0421 gaggactaag aaatggctaa actgaccaag cgcatgcgtg ttatccgcga gaaagttgat gcaaccaaac
0491 agtacgacat caacgaagct atcgcactgc tgaaagagc
|
