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PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
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Nat Cell Biol. 2000;2(4):212-8.
A new ABC transporter mediating the detachment of lipid-modified proteins from membranes.
Yakushi T, Masuda K, Narita S, Matsuyama S, Tokuda H.
(
10783239
)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
lolD
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Related strains
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Strains Search
|
Search strains by gene name:
lolD
Search strains by all related name:
lolD b1117 ECK1103 JW5162 ycfV
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General information (Go to Linear View: )
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Gene Name
|
lolD
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Alternative name
|
b1117,ECK1103,JW5162,ycfV
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Location, Length
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1,178,196 - 1,178,897
(
+
)
;
25.36
min
;
702
(bp) ,
233
(aa)
|
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Product
|
outer membrane-specific lipoprotein transporter subunit
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Note
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ATP-binding component of ABC superfamily; ECK1103:JW5162:b1117
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Function
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PID
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85674841
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
LOLD_ECOLI
(
P75957
;
Q9R7N6
)
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- Protein name
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RecName: Full=Lipoprotein-releasing system ATP-binding protein lolD; EC=3.6.3.-;
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- Synonyms
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- Gene name
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Name=lolD; Synonyms=ycfV; OrderedLocusNames=b1117, JW5162;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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outer membrane-specific lipoprotein transporter subunit [Escherichia coli str. K-12 substr. W3110]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
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0001 MNKILLQCDN LCKRYQEGSV QTDVLHNVSF SVGEGEMMAI VGSSGSGKST LLHLLGGLDT PTSGDVIFNG
0071 QPMSKLSSAA KAELRNQKLG FIYQFHHLLP DFTALENVAM PLLIGKKKPA EINSRALEML KAVGLDHRAN
0141 HRPSELSGGE RQRVAIARAL VNNPRLVLAD EPTGNLDARN ADSIFQLLGE LNRLQGTAFL VVTHDLQLAK
0211 RMSRQLEMRD GRLTAELSLM GAE
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTCATTGTTA TTGCGCTGGT GGCGATGGCT
-070 ATCGCGCTGC TGTCTACGCT TTACCCTTCA TGGCGCGCTG CCGCCACTCA ACCCGCTGAG GCTTTACGTT
0001 atgaataaga tcctgttgca atgcgacaac ctgtgcaaac gctatcagga aggcagtgtg caaaccgatg
0071 tgctgcacaa tgtcagtttc agcgtcggcg aaggtgaaat gatggcgatc gtcggtagct ctggttccgg
0141 taaaagtacc ttgctgcacc tgctgggcgg gctggatacg ccaacctccg gcgatgtgat ttttaatggt
0211 cagccaatga gcaaactgtc gtcggcagcg aaagctgaac tgcgcaacca gaagctgggc tttatttatc
0281 agtttcacca cctgctgccg gattttaccg ccctggaaaa cgtggctatg ccgctgctga ttggcaagaa
0351 aaagcccgct gaaatcaaca gccgtgcact tgagatgtta aaagcggtgg ggctggatca tcgtgcgaat
0421 caccgcccat ctgaactttc tggcggcgaa cgccagcgtg tggcgattgc ccgtgcgctg gtgaataacc
0491 cgcgcctggt actggcggat gaacctaccg gtaacctcga tgcgcgtaac gccgacagca tcttccagtt
0561 gcttggggaa ttgaatcgct tgcagggcac cgccttcctg gtggttactc acgacctgca actggcgaaa
0631 cgtatgagcc gccagttaga aatgcgtgat ggtcgtctga cggcggaact gagcctgatg ggggcggagt
0701 aaTGGCGATG CCTTTATCGT TATTAATTGG CCTGCGTTTT AGTCGCGGAC GGCGGCGCGG CGGCATGGTG
0771 TCGCTGATCT CCGTTATTTC TACCATTGGC AT
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