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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ybhF
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Related strains
|
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Strains Search
|
Search strains by gene name:
ybhF
Search strains by all related name:
ybhF b0794 ECK0783 JW5104
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General information (Go to Linear View: )
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Gene Name
|
ybhF
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Alternative name
|
b0794,ECK0783,JW5104
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Location, Length
|
827,667 - 829,403
(
-
)
;
17.81
min
;
1737
(bp) ,
578
(aa)
|
|
Product
|
fused predicted transporter subunits and ATP-binding components of ABC superfamily
|
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Note
|
ECK0783:JW5104:b0794
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Function
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PID
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85674764
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
YBHF_ECOLI
(
P0A9U1
;
P75776; Q9R7S3; Q9R7S4
)
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- Protein name
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RecName: Full=Uncharacterized ABC transporter ATP-binding protein ybhF;
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- Synonyms
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- Gene name
|
Name=ybhF; OrderedLocusNames=b0794, JW5104;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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|
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nr
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BLAST
|
fused predicted transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli str. K-12 substr. W3110]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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|
| Sequences |
Amino acid
FASTA format
|
0001 MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM RMLAGLLKPD SGSATVIGFD
0071 PIKNDGALHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEARKQTFA RLLEFTSLGP FTGRLAGKLS
0141 GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM VHELAGEGML ILWSTSYLDE AEQCRDVLLM
0211 NEGELLYQGE PKALTQTMAG RSFLMTSPHE GNRKLLQRAL KLPQVSDGMI QGKSVRLILK KEATPDDIRH
0281 ADGMPEININ ETTPRFEDAF IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF
0351 AVKRGEIFGL LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA RQHLGYMAQK FSLYGNLTVE
0421 QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL KSIASHATDE LPLGFKQRLA LACSLMHEPD ILFLDEPTSG
0491 VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS GTPDDLKAQS ANDEQPDPTM
0561 EQAFIQLIHD WDKEHSNE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 accgacctcg tctatcgcct gcgtattgtg
-070 gtgaccgacg ccgatgatgc gttacgccag ggaatgccag tgacggtaca attcggtgac gaggcaggac
0001 atgaatgatg ccgttatcac gctgaacggc ctggaaaaac gctttccggg catggacaag cccgccgtcg
0071 cgccgctcga ttgtaccatt cacgccggtt atgtgacggg gttggtgggg ccggacggtg caggtaaaac
0141 cacgctgatg cggatgttgg cgggattact gaaacccgac agcggcagtg ccacggtgat tggctttgat
0211 ccgatcaaaa acgacggcgc gctgcacgcc gtgctcggtt atatgccgca gaaatttggt ctgtatgaag
0281 atctcacggt gatggagaac ctcaatctgt acgcggattt gcgcagcgtc accggcgagg cacgtaagca
0351 aacttttgct cgcctgctgg agtttacgtc tcttgggccg tttaccggac gcctggcggg caagctctcc
0421 ggtgggatga aacaaaaact cggtctggcc tgtaccctgg tgggcgaacc gaaagtgttg ctgctcgatg
0491 aacccggcgt cggcgttgac cctatctcac ggcgcgaact gtggcagatg gtgcatgagc tggcgggcga
0561 agggatgtta atcctctgga gtacctcgta tctcgacgaa gccgagcagt gccgtgacgt gttactgatg
0631 aacgaaggcg agttgctgta tcagggagaa ccaaaagccc tgacacaaac catggccgga cgcagctttc
0701 tgatgaccag tccacacgag ggcaaccgca aactgttgca acgcgccttg aaactgccgc aggtcagcga
0771 cggcatgatt caggggaaat cggtacgtct gatcctcaaa aaagaggcca caccagacga tattcgccat
0841 gccgacggga tgccggaaat caacatcaac gaaactacgc cgcgttttga agatgcgttt attgatttgc
0911 tgggcggtgc cggaacctcg gaatcgccgc tgggcgcaat attacatacg gtagaaggca cacccggcga
0981 gacggtgatc gaagcgaaag aactgaccaa gaaatttggg gattttgccg ccaccgatca cgtcaacttt
1051 gccgttaaac gtggggagat ttttggtttg ctggggccaa acggcgcggg taaatcgacc acctttaaga
1121 tgatgtgcgg tttgctggtg ccgacttccg gccaggcgct ggtgctgggg atggatctga aagagagttc
1191 cggtaaagcg cgccagcatc tcggctatat ggcgcaaaaa ttttcgctct acggtaacct gacggtcgaa
1261 cagaatttac gctttttctc tggtgtgtat ggcttacgcg gtcgggcgca gaacgaaaaa atctcccgca
1331 tgagcgaggc gttcggcctg aaaagtatcg cctcccacgc caccgatgaa ctgccattag gttttaaaca
1401 gcggctggcg ctggcctgtt cgctgatgca tgaaccggac attctgtttc tcgacgaacc gacttccggc
1471 gttgaccccc tcacccgccg tgaattttgg ctgcacatca acagcatggt agagaaaggc gtcacggtga
1541 tggtcaccac ccactttatg gatgaagcgg aatattgcga ccgcatcggc ctggtgtacc gcgggaaatt
1611 aatcgccagc ggcacgccgg acgatttgaa agcacagtcg gctaacgatg agcaacccga tcccaccatg
1681 gagcaagcct ttattcagtt gatccacgac tgggataagg agcatagcaa tgagtaaccc gatcctgtcc
1751 tggcgtcgcg tacgggcgct gtgcgttaaa gagacgcggc agatcgttcg cgatccgagt agctggctga
1821 ttgcggtagt gatcccg
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