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PEC Original Annotations
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Essentiality
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Class
|
non-essential
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|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ypaA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ypaA
Search strains by all related name:
ypaA b4543 ECK2237 JW5964
|
General information (Go to Linear View: )
|
|
Gene Name
|
ypaA
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|
Alternative name
|
b4543,ECK2237,JW5964
|
|
Location, Length
|
2,362,486 - 2,362,671
(
+
)
;
50.85
min
;
186
(bp) ,
61
(aa)
|
|
Product
|
|
|
Note
|
ECK2237:JW5964:b4543; hypothetical protein
|
|
Function
|
|
|
PID
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
(
)
|
|
- Protein name
|
|
|
- Synonyms
|
|
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- Gene name
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Homology Analysis
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|
BLAST
|
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Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
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|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTTGCGCATG CTGGAGCAGG GCTTTGAACG
-070 TGAGATTGTG CTGGCGACAA CCCAACTCAC TGATGCTGAT ATTCCGAACT GTCATTAAAA GGAGAGATTA
0001 atgactattg ctgaacggct gcggcaggaa ggacatcaaa ttggctggca ggaaggtaaa ttagaaggtt
0071 tgcatgaaca agccattaaa attgctttgc gcatgctgga acagggcttt gatcgtgacc aggtgctcgc
0141 ggccacccag ctaagcgaag ccgatctggc agcgaataac cactaaTTAA CACAGGCCCA CAGCCGATCC
0211 CCATGGGCCT TTGATATCAA TAACTACCTT TTATGCGTGG CCCATTTTTG CCTGATTTAA ACATCGCCAG
0281 TCGTTG
|
