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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
dppD
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Related strains
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Strains Search
|
Search strains by gene name:
dppD
Search strains by all related name:
dppD b3541 ECK3528 JW3510
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General information (Go to Linear View: )
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Gene Name
|
dppD
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Alternative name
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b3541,ECK3528,JW3510
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Location, Length
|
3,936,567 - 3,937,550
(
+
)
;
84.72
min
;
984
(bp) ,
327
(aa)
|
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Product
|
dipeptide transporter
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Note
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ATP-binding component of ABC superfamily; ECK3528:JW3510:b3541
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Function
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PID
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85676503
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
DPPD_ECOLI
(
P0AAG0
;
P37314; Q2M7K3
)
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- Protein name
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RecName: Full=Dipeptide transport ATP-binding protein dppD;
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- Synonyms
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- Gene name
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Name=dppD; OrderedLocusNames=b3541, JW3510;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
|
dipeptide transporter ATP-binding subunit [Escherichia coli O157:H7 EDL933]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
J Bacteriol. 1993;175:1452-1456
The periplasmic dipeptide permease system transports 5-aminolevulinic acid in Escherichia coli.
Verkamp, E., V. M. Backman, J. M. Bjornsson, D. Soll, and G. Eggertsson.
|
| Sequences |
Amino acid
FASTA format
|
0001 MALLNVDKLS VHFGDESAPF RAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP GRVMAEKLEF
0071 NGQDLQRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ GGNKSTRRQR AIDLLNQVGI
0141 PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP TTALDVTIQA QIIELLLELQ QKENMALVLI
0211 THDLALVAEA AHKIIVMYAG QVVETGDAHA IFHAPRHPYT QALLRALPEF AQDKERLASL PGVVPGKYDR
0281 PNGCLLNPRC PYATDRCRAE EPALNMLADG RQSKCHYPLD DAGRPTL
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCGGGTCTGG CGATCCTGCT GACGGTGCTG
-070 GCATTTAACC TGATGGGTGA CGGTCTGCGT GACGCGCTCG ATCCCAAACT GAAGCAGTAA GAGGTTCGAG
0001 atggcgttat taaatgtaga taaattatcg gtgcatttcg gcgacgaaag cgcgccgttc cgcgccgtag
0071 accgcatcag ctacagcgta aaacagggcg aagtggtcgg gattgtgggt gagtccggct ccggtaagtc
0141 ggtcagttca ctggcgatta tggggctgat tgattatccg ggccgcgtaa tggcagaaaa actggagttt
0211 aacggccagg atttgcagcg tatctcagaa aaagagcgcc gcaacctggt gggtgccgaa gtggcgatga
0281 tcttccagga cccgatgacc agccttaacc cgtgctacac cgtgggtttc cagattatgg aagcgattaa
0351 ggtgcatcag ggcggcaaca aaagtacccg ccgtcagcga gcgattgacc tgctgaatca ggtcggtatt
0421 cccgatccgg catcgcgtct ggatgtttac ccgcatcagc tttccggcgg catgagccag cgcgtgatga
0491 tcgccatggc gattgcctgt cggccaaaac tgctgattgc cgatgaaccg accaccgcgc tggacgtgac
0561 cattcaggcg caaatcatcg aactactgct ggagctacag cagaaagaga acatggcgct ggtgttaatt
0631 acccatgacc tggcgctggt ggcggaagcg gcacataaaa tcatcgtgat gtatgcaggc caggtggtgg
0701 aaaccggtga tgcgcacgcc atcttccatg cgccgcgtca cccgtatact caggcattgc tgcgtgcgct
0771 gccagaattt gctcaggaca aagaacgtct ggcgtcgttg ccaggtgtcg ttcccggcaa gtacgaccgc
0841 ccgaacggct gcctgcttaa cccgcgctgc ccctatgcca ctgacagatg tcgcgctgaa gaaccggcgc
0911 tgaatatgct cgctgacggg cgtcagtcca aatgccatta cccacttgat gatgccggga ggccgacact
0981 atgaGTACGC AAGAGGCCAC CCTGCAACAA CCGCTGTTGC AGGCTATCGA CCTGAAAAAA CATTATCCGG
1051 TGAAGAAAGG CATGTTCGCG CCGGAACGTC TGGT
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