MG1655
W3110
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Gene Report : mrdB
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  mrdB
Related strains
     Strains Search Search strains by gene name:  mrdB   Search strains by all related name:  mrdB b0634 ECK0627 JW0629 rodA

General information  (Go to Linear View:)
 Gene Name mrdB  
 Alternative name b0634,ECK0627,JW0629,rodA  
 Location, Length 665,623 - 666,735 (  -  ) ;   14.33 min ; 1113 (bp) ,   370 (aa) Go to Linear View
 Product cell wall shape-determining protein  
 Note ECK0627:JW0629:b0634  
 Function  
 PID 1651261  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RODA_ECOLI ( P0ABG7 ; P13409; P15035 )
    -  Protein name RecName: Full=Rod shape-determining protein rodA;  
    -  Synonyms  
    -  Gene name Name=mrdB; Synonyms=rodA; OrderedLocusNames=b0634, JW0629;  

 Linear View
View Location
   655.0  –  680.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Rod shape-determining protein rodA  
        PSI-BLAST
    nr
         BLAST cell wall shape-determining protein [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc mrdB 

MMBR References
J Bacteriol. 1983;155(2):854-9.
Identification of the rodA gene product of Escherichia coli.
Stoker NG, Pratt JM, Spratt BG. ( 6348029 )

Sequences
Amino acid
FASTA format
0001 MTDNPNKKTF WDKVHLDPTM LLILLALLVY SALVIWSASG QDIGMMERKI GQIAMGLVIM VVMAQIPPRV 
0071 YEGWAPYLYI ICIILLVAVD AFGAISKGAQ RWLDLGIVRF QPSEIAKIAV PLMVARFINR DVCPPSLKNT 
0141 GIALVLIFMP TLLVAAQPDL GTSILVALSG LFVLFLSGLS WRLIGVAVVL VAAFIPILWF FLMHDYQRQR 
0211 VMMLLDPESD PLGAGYHIIQ SKIAIGSGGL RGKGWLHGTQ SQLEFLPERH TDFIFAVLAE ELGLVGILIL 
0281 LALYILLIMR GLWIAARAQT TFGRVMAGGL MLILFVYVFV NIGMVSGILP VVGVPLPLVS YGGSALIVLM 
0351 AGFGIVMSIH THRKMLSKSV 

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             cactgatgcg ccagatcctc gaccacatta 
-070 tgctgggtga taacaacacc gatctgcctg cggaaaatcc agcggttgcc gcagcggagg accattaatc 
0001 atgacggata atccgaataa aaaaacattc tgggataaag tccatctcga tcccacaatg ctgctgatct 
0071 tactggcatt gctggtttac agcgccctgg ttatctggag cgccagcggt caggatattg gcatgatgga 
0141 gcgtaaaatc ggccaaatcg cgatgggtct ggtcatcatg gtggtgatgg cgcaaattcc tccacgcgtt 
0211 tatgaaggct gggcccccta tctctatatc atctgtatta ttttgctggt ggcggtagat gctttcggtg 
0281 ccatctctaa aggtgctcaa cgctggctgg acctcggtat tgttcgtttt cagccgtcgg aaattgccaa 
0351 aatagccgta ccactgatgg ttgcgcgctt tatcaaccgc gacgtttgcc cgccatcgtt gaagaacact 
0421 ggcatcgcgc tggtgctgat atttatgccc acgctgctgg tggctgcaca gcctgacctg ggaacatcaa 
0491 tcctcgttgc gctttccggt ctgtttgtac tgttcctctc tggccttagc tggcgtctga ttggcgtcgc 
0561 agtagtgctg gtagcggcgt tcattccgat tctgtggttc ttcctgatgc atgattacca gcgccagcgc 
0631 gtaatgatgc tcctggaccc ggaatcagac ccactcggcg cgggctatca cattattcag tctaaaattg 
0701 ctattggctc cggcggatta cgcggcaaag gctggctgca cggcactcag tcacagcttg aatttctccc 
0771 cgaacgccat actgacttta tcttcgcggt actggcggaa gagctgggat tagtgggcat tctgattctg 
0841 ctcgctctct acattctgct gatcatgcgc gggctgtgga tagccgccag agcgcaaacc acctttggtc 
0911 gcgtcatggc tggcggctta atgctgatat tattcgttta tgtcttcgta aatattggta tggtaagcgg 
0981 tattctgccg gttgtagggg ttccgctccc actggtcagt tatggaggat cggcgctaat tgtgctgatg 
1051 gctgggttcg ggattgtaat gtcaatccac acccacagga aaatgttgtc gaaaagcgtg taagaggtgc 
1121 gcaatgcgta agcagtggct cgggatctgc atcgcggcag gaatgctcgc ggcatgtaca agcgatgatg 
1191 gtcagcaaca gacggtaagt gta