MG1655
W3110
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Gene Report : rihC
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  rihC
Related strains
     Strains Search Search strains by gene name:  rihC   Search strains by all related name:  rihC b0030 ECK0031 JW0028 yaaF

General information  (Go to Linear View:)
 Gene Name rihC  
 Alternative name b0030,ECK0031,JW0028,yaaF  
 Location, Length 27,293 - 28,207 (  +  ) ;   0.59 min ; 915 (bp) ,   304 (aa) Go to Linear View
 Product ribonucleoside hydrolase 3  
 Note ECK0031:JW0028:b0030  
 Function  
 PID 21321912  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RIHC_ECOLI ( P22564 )
    -  Protein name RecName: Full=Non-specific ribonucleoside hydrolase rihC; EC=3.2.-.-; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase;  
    -  Synonyms  
    -  Gene name Name=rihC; Synonyms=yaaF; OrderedLocusNames=b0030, JW0028;  

 Linear View
View Location
   15.0  –  40.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Non-specific ribonucleoside hydrolase rihC; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase  
        PSI-BLAST
    nr
         BLAST ribonucleoside hydrolase 3 [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc rihC 

Sequences
Amino acid
FASTA format
0001 MRLPIFLDTD PGIDDAVAIA AAIFAPELDL QLMTTVAGNV SVEKTTRNAL QLLHFWNAEI PLAQGAAVPL 
0071 VRAPRDAASV HGESGMAGYD FVEHNRKPLG IPAFLAIRDA LMRAPEPVTL VAIGPLTNIA LLLSQCPECK 
0141 PYIRRLVIMG GSAGRGNCTP NAEFNIAADP EAAACVFRSG IEIVMCGLDV TNQAILTPDY LSTLPQLNRT 
0211 GKMLHALFSH YRSGSMQSGL RMHDLCAIAW LVRPDLFTLK PCFVAVETQG EFTSGTTVVD IDGCLGKPAN 
0281 VQVALDLDVK GFQQWVAEVL ALAS

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             AAGAGCTGCG TGTCGATATT CGTGAAGTCG 
-070 ATTAAGTCAT TAGCAGCCTA AGTTATGCGA AAATGCCGGT CTTGTTACCG GCATTTTTTA TGGAGAAAAC 
0001 atgcgtttac ctatcttcct cgatactgac cccggcattg acgatgccgt cgccattgcc gccgcgattt 
0071 ttgcacccga actcgacctg caactgatga ccaccgtcgc gggtaatgtc tcggttgaga aaactacccg 
0141 caatgccctg caactgctgc atttctggaa tgcggagatt ccgctcgccc aaggggccgc tgtgccactg 
0211 gtacgcgcac cgcgtgatgc ggcatctgtg cacggcgaat cgggaatggc tggctacgac tttgttgagc 
0281 acaaccgaaa gccgctcggg ataccggcgt ttctggcgat tcgggatgcc ctgatgcgtg caccagagcc 
0351 tgttaccctg gtggccatcg gcccgttaac caatattgcg ctgttacttt cacaatgccc ggaatgcaag 
0421 ccgtatattc gccgtctggt gatcatgggt ggttctgccg gacgcggcaa ctgtacgcca aacgccgagt 
0491 ttaatattgc tgccgatcca gaagctgctg cctgtgtctt ccgcagtggt attgaaatcg tcatgtgcgg 
0561 tttggatgtc accaatcagg caatattaac tcctgactat ctctctacac tgccgcagtt aaaccgtacc 
0631 gggaaaatgc ttcacgccct gtttagccac taccgtagcg gcagtatgca aagcggcttg cgaatgcacg 
0701 atctctgcgc catcgcctgg ctggtgcgcc cggacctgtt cactctcaaa ccctgttttg tggcagtgga 
0771 aactcagggc gaatttacct caggcacgac ggtggttgat atcgacggtt gcctgggcaa gccagccaat 
0841 gtacaggtgg cattggatct ggatgtgaaa ggcttccagc agtgggtggc tgaggtgctg gctctggcgt 
0911 cgtaaCCTGT CACATGTTAT TGGCATGCAG TCATTCATCG ACTCATGCCT TTCACTGATA TCCCTCCCTG 
0981 TTTATCATTA ATTTCTAATT ATCAGCGTTT TTGGC