MG1655
W3110
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Gene Report : rpsT
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Mol Microbiol. 1993;7(6):983-92.
Ribosome activity and modification of 16S RNA are influenced by deletion of ribosomal protein S20.
Ryden-Aulin M, Shaoping Z, Kylsten P, Isaksson LA. ( 7683367 )
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  rpsT
Related strains
     Strains Search Search strains by gene name:  rpsT   Search strains by all related name:  rpsT b0023 ECK0024 JW0022 sup

General information  (Go to Linear View:)
 Gene Name rpsT  
 Alternative name b0023,ECK0024,JW0022,sup  
 Location, Length 20,815 - 21,078 (  -  ) ;   0.45 min ; 264 (bp) ,   87 (aa) Go to Linear View
 Product 30S ribosomal subunit protein S20  
 Note ECK0024:JW0022:b0023  
 Function  
 PID 21321906  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RS20_ECOLI ( P0A7U7 ; P02378 )
    -  Protein name RecName: Full=30S ribosomal protein S20;  
    -  Synonyms  
    -  Gene name Name=rpsT; OrderedLocusNames=b0023, JW0022;  

 Linear View
View Location
   10.0  –  35.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
        PSI-BLAST  
    SWISS-PROT
        BLAST  
        PSI-BLAST
    nr
         BLAST 30S ribosomal protein S20 [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc rpsT 

Sequences
Amino acid
FASTA format
0001 MANIKSAKKR AIQSEKARKH NASRRSMMRT FIKKVYAAIE AGDKAAAQKA FNEMQPIVDR QAAKGLIHKN 
0071 KAARHKANLT AQINKLA

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             acggcgctta tttgcacaaa tccattgaca 
-070 aaagaaggct aaaagggcat attcctcggc ctttgaattg tccatataga acacatttgg gagttggacc 
0001 ttggctaata tcaaatcagc taagaagcgc gccattcagt ctgaaaaggc tcgtaagcac aacgcaagcc 
0071 gtcgctctat gatgcgtact ttcatcaaga aagtatacgc agctatcgaa gctggcgaca aagctgctgc 
0141 acagaaagca tttaacgaaa tgcaaccgat cgtggaccgt caggctgcta aaggtctgat ccacaaaaac 
0211 aaagctgcac gtcataaggc taacctgact gcacagatca acaaactggc ttaatcgcca atttgctgaa 
0281 gctttgtgaa aaagcccgcg caagcgggtt tttttatgcc tgctgctttt gtgatgcgtg agagaacaca 
0351 ctgccggttg ccag