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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
Mol Gen Genet. 1995;248(2):190-4.
Sigma S-dependent overexpression of ftsZ in an Escherichia coli K-12 rpoB mutant that is resistant to the division inhibitors DicB and DicF RNA.
Cam K, Cuzange A, Bouche JP.
(
7651342
)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
rpoS
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Related strains
|
|
Strains Search
|
Search strains by gene name:
rpoS
Search strains by all related name:
rpoS abrD appR b2741 csi2 dpeB ECK2736 JW5437 katF nur otsX sigS
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General information (Go to Linear View: )
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Gene Name
|
rpoS
|
|
Alternative name
|
abrD,appR,b2741,csi2,dpeB,ECK2736,JW5437,katF,nur,otsX,sigS
|
|
Location, Length
|
2,865,215 - 2,866,090
(
-
)
;
61.67
min
;
876
(bp) ,
291
(aa)
|
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Product
|
RNA polymerase, sigma S (sigma 38) factor
|
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Note
|
ECK2736:JW5437:b2741
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Function
|
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PID
|
85675562
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RPOS_ECOLI
(
P13445
;
Q2MA88; Q79EB7
)
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- Protein name
|
RecName: Full=RNA polymerase sigma factor rpoS; AltName: Full=Sigma-38;
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- Synonyms
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- Gene name
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OrderedLocusNames=b2741, JW5437;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
|
RpoS variant [Escherichia coli]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
|
0001 MAEEELLSQG ATQRVLDATQ LYLGEIGYSP LLTAEEEVYF ARRALRGDVA SRRRMIESNL RLVVKIARRY
0071 GNRGLALLDL IEEGNLGLIR AVEKFDPERG FRFSTYATWW IRQTIERAIM NQTRTIRLPI HIVKELNVYL
0141 RTARELSHKL DHEPSAEEIA EQLDKPVDDV SRMLRLNERI TSVDTPLGGD SEKALLDILA DEKENGPEDT
0211 TQDDDMKQSI VKWLFELNAK QREVLARRFG LLGYEAATLE DVGREIGLTR ERVRQIQVEG LRRLREILQT
0281 QGLNIEALFR E
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gaaagttcat gatttaaatg aagatgcgga
-070 atttgatgag aacggagttg aggtttttga cgaaaaggcc ttagtagaat aggaacccag tgataacgat
0001 ttggccgaag aggaactgtt atcgcaggga gccacacagc gtgtgttgga cgcgactcag ctttaccttg
0071 gtgagattgg ttattcacca ctgttaacgg ccgaagaaga agtttatttt gcgcgtcgcg cactgcgtgg
0141 agatgtcgcc tctcgccgcc ggatgatcga gagtaacttg cgtctggtgg taaaaattgc ccgccgttat
0211 ggcaatcgtg gtctggcgtt gctggacctt atcgaagagg gcaacctggg gctgatccgc gcggtagaga
0281 agtttgaccc ggaacgtggt ttccgcttct caacatacgc aacctggtgg attcgccaga cgattgaacg
0351 ggcgattatg aaccaaaccc gtactattcg tttgccgatt cacatcgtaa aggagctgaa cgtttacctg
0421 cgaaccgcac gtgagttgtc ccataagctg gaccatgaac caagtgcgga agagatcgca gagcaactgg
0491 ataagccagt tgatgacgtc agccgtatgc ttcgtcttaa cgagcgcatt acctcggtag acaccccgct
0561 gggtggtgat tccgaaaaag cgttgctgga catcctggcc gatgaaaaag agaacggtcc ggaagatacc
0631 acgcaagatg acgatatgaa gcagagcatc gtcaaatggc tgttcgagct gaacgccaaa cagcgtgaag
0701 tgctggcacg tcgattcggt ttgctggggt acgaagcggc aacactggaa gatgtaggtc gtgaaattgg
0771 cctcacccgt gaacgtgttc gccagattca ggttgaaggc ctgcgccgtt tgcgcgaaat cctgcaaacg
0841 caggggctga atatcgaagc gctgttccgc gagtaagtaa gcatctgtca gaaaggccag tctcaagcga
0911 ggctggcctt ttctgtgcac aataaaaggt ccgatgccca tcggaccttt ttattaaggt caaatt
|
