MG1655
W3110
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Gene Report : araC
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  araC
Related strains
     Strains Search Search strains by gene name:  araC   Search strains by all related name:  araC b0064 ECK0065 JW0063

General information  (Go to Linear View:)
 Gene Name araC  
 Alternative name b0064,ECK0065,JW0063  
 Location, Length 70,387 - 71,265 (  +  ) ;   1.51 min ; 879 (bp) ,   292 (aa) Go to Linear View
 Product DNA-binding transcriptional dual regulator  
 Note ECK0065:JW0063:b0064  
 Function  
 PID 21321946  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) ARAC_ECOLI ( P0A9E0 ; P03021; Q47056 )
    -  Protein name RecName: Full=Arabinose operon regulatory protein;  
    -  Synonyms  
    -  Gene name Name=araC; OrderedLocusNames=b0064, JW0063;  

 Linear View
View Location
   60.0  –  85.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST Chain A, Escherichia Coli Regulatory Protein Arac Complexed With L- Arabinose  
    SWISS-PROT
         BLAST RecName: Full=Arabinose operon regulatory protein  
        PSI-BLAST
    nr
         BLAST DNA-binding transcriptional regulator AraC [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc araC 

MMBR References
Mol Gen Genet. 1980;180(1):219-26.
The araC regulatory gene mRNA contains a leader sequence.
Cass LG, Horwitz AH, Miyada CG, Greenfield L, Wilcox G. ( 6160371 )

Sequences
Amino acid
FASTA format
0001 MAEAQNDPLL PGYSFNAHLV AGLTPIEANG YLDFFIDRPL GMKGYILNLT IRGQGVVKNQ GREFVCRPGD 
0071 ILLFPPGEIH HYGRHPEARE WYHQWVYFRP RAYWHEWLNW PSIFANTGFF RPDEAHQPHF SDLFGQIINA 
0141 GQGEGRYSEL LAINLLEQLL LRRMEAINES LHPPMDNRVR EACQYISDHL ADSNFDIASV AQHVCLSPSR 
0211 LSHLFRQQLG ISVLSWREDQ RISQAKLLLS TTRMPIATVG RNVGFDDQLY FSRVFKKCTG ASPSEFRAGC 
0281 EEKVNDVAVK LS

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             TTGGGTTAGC GAGAAGAGCC AGTAAAAGAC 
-070 GCAGTGACGG CAATGTCTGA TGCAATATGG ACAATTGGTT TCTTCTCTGA ATGGTGGGAG TATGAAAAGT 
0001 atggctgaag cgcaaaatga tcccctgctg ccgggatact cgtttaacgc ccatctggtg gcgggtttaa 
0071 cgccgattga ggccaacggt tatctcgatt tttttatcga ccgaccgctg ggaatgaaag gttatattct 
0141 caatctcacc attcgcggtc agggggtggt gaaaaatcag ggacgagaat ttgtctgccg accgggtgat 
0211 attttgctgt tcccgccagg agagattcat cactacggtc gtcatccgga ggctcgcgaa tggtatcacc 
0281 agtgggttta ctttcgtccg cgcgcctact ggcatgaatg gcttaactgg ccgtcaatat ttgccaatac 
0351 gggtttcttt cgcccggatg aagcgcacca gccgcatttc agcgacctgt ttgggcaaat cattaacgcc 
0421 gggcaagggg aagggcgcta ttcggagctg ctggcgataa atctgcttga gcaattgtta ctgcggcgca 
0491 tggaagcgat taacgagtcg ctccatccac cgatggataa tcgggtacgc gaggcttgtc agtacatcag 
0561 cgatcacctg gcagacagca attttgatat cgccagcgtc gcacagcatg tttgcttgtc gccgtcgcgt 
0631 ctgtcacatc ttttccgcca gcagttaggg attagcgtct taagctggcg cgaggaccaa cgcattagtc 
0701 aggcgaagct gcttttgagc actacccgga tgcctatcgc caccgtcggt cgcaatgttg gttttgacga 
0771 tcaactctat ttctcgcgag tatttaaaaa atgcaccggg gccagcccga gcgagtttcg tgccggttgt 
0841 gaagaaaaag tgaatgatgt agccgtcaag ttgtcataaT TGGTAACGAA TCAGACAATT GACGGCTTGA 
0911 CGGAGTAGCA TAGGGTTTGC AGAATCCCTG CTTCGTCCAT TTGACAGGCA CATTATGCAA GCATTGCTG