|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
unknown
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rygC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rygC
Search strains by all related name:
rygC b4446 ECK2908
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
rygC
|
|
Alternative name
|
b4446,ECK2908
|
|
Location, Length
|
3,055,471 - 3,055,621
(
+
)
;
65.76
min
;
151
(bp) ,
|
|
Product
|
small RNA
|
|
Note
|
ECK2908:JWR0250:b4446
|
|
Function
|
|
|
PID
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
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PDB
|
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PSI-BLAST
|
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SWISS-PROT
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|
BLAST
|
RecName: Full=Small toxic protein ibsC
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
hypothetical protein EscherichcoliO157_12196 [Escherichia coli O157:H7 str. EC4024]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GAAAAACTCC CCGTTGAAGA GTGGGATATC
-070 CCTCTTCCTG CGGTGGTTAC ACCGTCGAAA GTCTGGGAGT GGTAAGGGCG ATACACCCGC ATCGCCCTGA
0001 ttgacatcgt tgattctttg acctaattta gtgagtaagg gtaagggagg attgctcctc ccctgagact
0071 gactgttaat aagcgctgaa acttatgagt aacagtacaa tcagtatgat gacaagtcgc atcataaccc
0141 ttctccttca aGCCCTCGCT TCGGTGAGGG CTTTACCGTT ACAGCCCCAT GCTGCCCTGC CATCGTAAAT
0211 CCCCATTAAA TAAACACAAC GCATTGATCT GACTTTGATT T
|
